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GWF2_RBX1_38_17_gwf2_scaffold_5446

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_5446_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2..715)
DNA (714bp) protein (238aa)
Uncharacterized protein id=4323426 bin=GWF2_OP9-related_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
phage antirepressor protein
GWF2_RBX1_38_17_gwf2_scaffold_5446_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(712..879)
DNA (168bp) protein (56aa)
id=24610897 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610897 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_5446_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1176..2549
DNA (1374bp) protein (458aa)
RNA methyltransferase, TrmA family; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] Tax=GWF2_RBX1_38_17_curated
RNA methyltransferase, TrmA family id=1850815 bin=GWE2_RBX1_39_32 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNA methyltransferase, TrmA family
GWF2_RBX1_38_17_gwf2_scaffold_5446_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2747..3040)
DNA (294bp) protein (98aa)
id=1850819 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1850819 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_5446_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3273..3878)
DNA (606bp) protein (202aa)
Uncharacterized protein id=1850820 bin=GWE2_RBX1_39_32 species=Flavobacterium sp. CF136 genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_5446_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4396..5067
DNA (672bp) protein (224aa)
excisionase family DNA-binding id=24610893 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
excisionase family DNA-binding Tax=GWF2_RBX1_38_17_curated
PTS fructose transporter subunit IIA
GWF2_RBX1_38_17_gwf2_scaffold_5446_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

5064..7049
DNA (1986bp) protein (662aa)
hypothetical protein Tax=GWF2_RBX1_38_17_curated
Hydrogenase-4 component B id=4323432 bin=GWF2_OP9-related_38_17 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_5446_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7073..7996
DNA (924bp) protein (308aa)
Respiratory-chain NADH dehydrogenase, subunit 1 id=1797702 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
respiratory-chain NADH dehydrogenase subunit 1 Tax=GWF2_RBX1_38_17_curated
respiratory-chain NADH dehydrogenase subunit 1
GWF2_RBX1_38_17_gwf2_scaffold_5446_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7993..8631
DNA (639bp) protein (213aa)
Putative uncharacterized protein id=1850877 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_5446_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8635..10041
DNA (1407bp) protein (469aa)
hyfF; protein HyfF (EC:1.-.-.-); K12141 hydrogenase-4 component F [EC:1.-.-.-] Tax=GWF2_RBX1_38_17_curated
hyfF; protein HyfF (EC:1.-.-.-)
Hydrogenase-4 component F id=1850880 bin=GWE2_RBX1_39_32 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_5446_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10054..11550
DNA (1497bp) protein (499aa)
NADH ubiquinone oxidoreductase subunit id=1797707 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Ni,Fe-hydrogenase III large subunit Tax=GWF2_RBX1_38_17_curated
Ni,Fe-hydrogenase III large subunit
GWF2_RBX1_38_17_gwf2_scaffold_5446_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11569..12324
DNA (756bp) protein (252aa)
NADH ubiquinone oxidoreductase, 20 kDa subunit id=1797709 bin=GWD2_RBX1-related_39_127 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
NADH ubiquinone oxidoreductase, 20 kDa subunit Tax=GWF2_RBX1_38_17_curated
NADH ubiquinone oxidoreductase, 20 kDa subunit
GWF2_RBX1_38_17_gwf2_scaffold_5446_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12647..13252
DNA (606bp) protein (202aa)
Transcriptional regulator, TetR family id=1850886 bin=GWE2_RBX1_39_32 species=Desulfotomaculum gibsoniae genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
transcriptional regulator Tax=GWF2_RBX1_38_17_curated
transcriptional regulator
GWF2_RBX1_38_17_gwf2_scaffold_5446_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(13189..13320)
DNA (132bp) protein (44aa)
id=24610885 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610885 Tax=GWF2_RBX1_38_17_curated
Displaying 14 items

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