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GWF2_RBX1_38_17_gwf2_scaffold_289

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Displaying items 1-30 of 93 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_289_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26..337)
DNA (312bp) protein (104aa)
id=2078730 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=2078730 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(476..655)
DNA (180bp) protein (60aa)
id=2078730 Tax=GWF2_RBX1_38_17_curated
id=2078730 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_289_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(861..1040)
DNA (180bp) protein (60aa)
id=1982854 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982854 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1124..1888)
DNA (765bp) protein (255aa)
id=3953359 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=3953359 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1891..2106)
DNA (216bp) protein (72aa)
id=1982851 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982851 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2134..3225)
DNA (1092bp) protein (364aa)
id=1982850 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982850 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3253..16212)
DNA (12960bp) protein (4320aa)
Uncharacterized protein id=3953363 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
Uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16539..16766)
DNA (228bp) protein (76aa)
id=24610409 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610409 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16741..16941)
DNA (201bp) protein (67aa)
id=1982844 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982844 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(16948..17253)
DNA (306bp) protein (102aa)
id=1982842 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982842 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17306..17620)
DNA (315bp) protein (105aa)
id=24610406 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610406 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17867..18145)
DNA (279bp) protein (93aa)
Transcriptional regulator, ArsR family protein id=1982837 bin=GWE2_RBX1_39_32 species=Acetonema longum genus=Acetonema taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative transcriptional regulator Tax=GWF2_RBX1_38_17_curated
putative transcriptional regulator
GWF2_RBX1_38_17_gwf2_scaffold_289_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18332..19588)
DNA (1257bp) protein (419aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=GWF2_RBX1_38_17_curated
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase id=3953373 bin=GWF2_OP9-related_38_17 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_289_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19600..20436)
DNA (837bp) protein (279aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51] Tax=GWF2_RBX1_38_17_curated
pheA; P-protein (EC:5.4.99.5)
Prephenate dehydratase id=1982832 bin=GWE2_RBX1_39_32 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_289_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20529..20807)
DNA (279bp) protein (93aa)
acylphosphatase id=1982829 bin=GWE2_RBX1_39_32 species=Archaeoglobus sulfaticallidus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Acylphosphatase Tax=GWF2_RBX1_38_17_curated
Acylphosphate phosphohydrolase
GWF2_RBX1_38_17_gwf2_scaffold_289_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20811..21326)
DNA (516bp) protein (172aa)
CMP/dCMP deaminase, zinc-binding protein id=1982826 bin=GWE2_RBX1_39_32 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
deoxycytidylate deaminase Tax=GWF2_RBX1_38_17_curated
deoxycytidylate deaminase
GWF2_RBX1_38_17_gwf2_scaffold_289_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21368..22612)
DNA (1245bp) protein (415aa)
serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=GWF2_RBX1_38_17_curated
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase id=2078709 bin=GWD2_RBX1-related_39_127 species=Syntrophobotulus glycolicus genus=Syntrophobotulus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_289_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22702..23940)
DNA (1239bp) protein (413aa)
PAS sensor protein id=1982822 bin=GWE2_RBX1_39_32 species=Chloroflexus aurantiacus genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
PAS sensor protein Tax=GWF2_RBX1_38_17_curated
PAS sensor protein
GWF2_RBX1_38_17_gwf2_scaffold_289_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24280..27183
DNA (2904bp) protein (968aa)
protein serine phosphatase with GAF(s) sensor(s) id=24610398 bin=RAAC11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RAAC11 organism_group=Unknown_CP
protein serine phosphatase with GAF(s) sensor(s) Tax=GWF2_RBX1_38_17_curated
protein serine phosphatase with GAF(s) sensor(s)
GWF2_RBX1_38_17_gwf2_scaffold_289_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27249..27587
DNA (339bp) protein (113aa)
Anti-sigma-factor antagonist id=1982818 bin=GWE2_RBX1_39_32 species=Leptonema illini genus=Leptonema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
anti-anti-sigma factor; K04749 anti-sigma B factor antagonist Tax=GWF2_RBX1_38_17_curated
anti-anti-sigma factor
GWF2_RBX1_38_17_gwf2_scaffold_289_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

27659..29416
DNA (1758bp) protein (586aa)
Type II secretion system protein E id=1982816 bin=GWE2_RBX1_39_32 species=Caldicellulosiruptor owensensis genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
type ii secretion system protein e; K02652 type IV pilus assembly protein PilB Tax=GWF2_RBX1_38_17_curated
type ii secretion system protein e
GWF2_RBX1_38_17_gwf2_scaffold_289_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

29497..30594
DNA (1098bp) protein (366aa)
Type II secretion system protein id=1982814 bin=GWE2_RBX1_39_32 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
tapC; type IV pilus assembly protein TapC Tax=GWF2_RBX1_38_17_curated
tapC; type IV pilus assembly protein TapC
GWF2_RBX1_38_17_gwf2_scaffold_289_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

30676..31038
DNA (363bp) protein (121aa)
id=1982813 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982813 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31054..31635
DNA (582bp) protein (194aa)
id=1982812 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982812 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

31644..32780
DNA (1137bp) protein (379aa)
id=1982810 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982810 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(32968..34206)
DNA (1239bp) protein (413aa)
id=24610391 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610391 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_289_27
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(34644..36020)
DNA (1377bp) protein (459aa)
DNA repair protein RadA (EC:2.1.1.63); K04485 DNA repair protein RadA/Sms Tax=GWF2_RBX1_38_17_curated
DNA repair protein radA id=2078692 bin=GWD2_RBX1-related_39_127 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
DNA repair protein RadA
GWF2_RBX1_38_17_gwf2_scaffold_289_28
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(36027..38471)
DNA (2445bp) protein (815aa)
ATPase AAA-2 domain protein id=1982805 bin=GWE2_RBX1_39_32 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ATPase AAA-2 domain-containing protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=GWF2_RBX1_38_17_curated
clpC; competence regulator
GWF2_RBX1_38_17_gwf2_scaffold_289_29
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(38854..40059)
DNA (1206bp) protein (402aa)
glycosyl transferase, group 1; K13057 trehalose synthase [EC:2.4.1.245] Tax=GWF2_RBX1_38_17_curated
Trehalose synthase (ADP-glucose) id=1982803 bin=GWE2_RBX1_39_32 species=Methanoculleus marisnigri genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
glycosyl transferase, group 1
GWF2_RBX1_38_17_gwf2_scaffold_289_30
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

40231..41313
DNA (1083bp) protein (361aa)
id=1982770 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1982770 Tax=GWF2_RBX1_38_17_curated
Displaying items 1-30 of 93 in total

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