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GWF2_RBX1_38_17_gwf2_scaffold_3447

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_3447_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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64..978
DNA (915bp) protein (305aa)
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=GWF2_RBX1_38_17_curated
Dihydroorotate dehydrogenase id=1751822 bin=GWE2_RBX1_39_32 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
dihydroorotate dehydrogenase
GWF2_RBX1_38_17_gwf2_scaffold_3447_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1100..1741
DNA (642bp) protein (214aa)
50S ribosomal protein L25 id=1751817 bin=GWE2_RBX1_39_32 species=Bacillus pseudofirmus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ctc; 50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 Tax=GWF2_RBX1_38_17_curated
ctc; 50S ribosomal protein L25/general stress protein Ctc
GWF2_RBX1_38_17_gwf2_scaffold_3447_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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1755..2282
DNA (528bp) protein (176aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=GWF2_RBX1_38_17_curated
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase id=1960015 bin=GWD2_RBX1-related_39_127 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_3447_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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2283..3086
DNA (804bp) protein (268aa)
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] Tax=GWF2_RBX1_38_17_curated
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase id=4072423 bin=GWF2_OP9-related_38_17 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_3447_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3083..3610)
DNA (528bp) protein (176aa)
Metal-dependent phosphohydrolase HD sub domain-containing protein id=1751805 bin=GWE2_RBX1_39_32 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative metal dependent phosphohydrolase Tax=GWF2_RBX1_38_17_curated
metal dependent phosphohydrolase
GWF2_RBX1_38_17_gwf2_scaffold_3447_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3658..4458)
DNA (801bp) protein (267aa)
tryptophan synthase, alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] id=24608461 bin=RAAC11 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
tryptophan synthase, alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=GWF2_RBX1_38_17_curated
tryptophan synthase subunit alpha (EC:4.2.1.20)
GWF2_RBX1_38_17_gwf2_scaffold_3447_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(4491..5681)
DNA (1191bp) protein (397aa)
tryptophan synthase subunit beta; K01696 tryptophan synthase beta chain [EC:4.2.1.20] Tax=GWF2_RBX1_38_17_curated
Tryptophan synthase beta chain id=1960007 bin=GWD2_RBX1-related_39_127 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
tryptophan synthase subunit beta
GWF2_RBX1_38_17_gwf2_scaffold_3447_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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6105..8450
DNA (2346bp) protein (782aa)
Putative uncharacterized protein id=4072432 bin=GWF2_OP9-related_38_17 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_3447_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(8456..9730)
DNA (1275bp) protein (425aa)
fo synthase subunit 1 (EC:2.5.1.-); K11780 FO synthase subunit 1 [EC:2.5.1.77] Tax=GWF2_RBX1_38_17_curated
fo synthase subunit 1 (EC:2.5.1.-)
FO synthase subunit 1 id=1751771 bin=GWE2_RBX1_39_32 species=Methanothermus fervidus genus=Methanothermus taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GWF2_RBX1_38_17_gwf2_scaffold_3447_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(9847..10410)
DNA (564bp) protein (188aa)
id=1751770 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1751770 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3447_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(10487..10867)
DNA (381bp) protein (127aa)
Response regulator containing a CheY-like receiver domain and an HD-GYP domain id=24608466 bin=RAAC11 species=[Ruminococcus] torques genus=Blautia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RAAC11 organism_group=Unknown_CP
Response regulator containing a CheY-like receiver domain and an HD-GYP domain Tax=GWF2_RBX1_38_17_curated
Response regulator containing a CheY-like receiver domain and an HD-GYP domain
GWF2_RBX1_38_17_gwf2_scaffold_3447_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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11117..13096
DNA (1980bp) protein (660aa)
Excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=GWF2_RBX1_38_17_curated
UvrABC system protein B id=1751768 bin=GWE2_RBX1_39_32 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Excinuclease ABC subunit B
GWF2_RBX1_38_17_gwf2_scaffold_3447_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13331..14113
DNA (783bp) protein (261aa)
id=1751767 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1751767 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3447_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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14130..15380
DNA (1251bp) protein (417aa)
id=1751766 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1751766 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3447_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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15529..17334
DNA (1806bp) protein (602aa)
Peptidase S8 and S53 subtilisin kexin sedolisin id=1751765 bin=GWE2_RBX1_39_32 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
peptidase S8 and S53 subtilisin kexin sedolisin Tax=GWF2_RBX1_38_17_curated
peptidase S8 and S53 subtilisin kexin sedolisin
GWF2_RBX1_38_17_gwf2_scaffold_3447_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

17300..18169
DNA (870bp) protein (290aa)
id=1751764 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1751764 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_3447_trna_1
unknown

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18236..18309
DNA (74bp)
transferRNA
GWF2_RBX1_38_17_gwf2_scaffold_3447_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(18327..19187)
DNA (861bp) protein (287aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily id=1959946 bin=GWD2_RBX1-related_39_127 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
putative hydrolase or acyltransferase of alpha/beta superfamily Tax=GWF2_RBX1_38_17_curated
putative hydrolase or acyltransferase of alpha/beta superfamily
GWF2_RBX1_38_17_gwf2_scaffold_3447_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(19138..19242)
DNA (105bp) protein (35aa)
Tax=GWF2_RBX1_38_17_curated
Displaying 19 items

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