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GWF2_RBX1_38_17_gwf2_scaffold_2719

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_2719_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(3..182)
DNA (180bp) protein (60aa)
id=1897232 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1897232 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(201..353)
DNA (153bp) protein (51aa)
id=1897231 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1897231 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(384..2534)
DNA (2151bp) protein (717aa)
ferrous iron transporter B; K04759 ferrous iron transport protein B Tax=GWF2_RBX1_38_17_curated
ferrous iron transporter B; K04759 ferrous iron transport protein B id=24609981 bin=RAAC11 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
ferrous iron transporter B
GWF2_RBX1_38_17_gwf2_scaffold_2719_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2531..2758)
DNA (228bp) protein (76aa)
Conserved domain protein id=1897229 bin=GWD2_RBX1-related_39_127 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
hypothetical protein; K04758 ferrous iron transport protein A Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2719_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2761..2997)
DNA (237bp) protein (79aa)
Ferric uptake regulator, Fur family id=2171288 bin=GWE2_RBX1_39_32 species=Pyrococcus sp. ST04 genus=Pyrococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Ferric uptake regulator, Fur family Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3221..3658)
DNA (438bp) protein (146aa)
Ferric uptake regulator, Fur family id=1897227 bin=GWD2_RBX1-related_39_127 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Ferric uptake regulator, Fur family Tax=GWF2_RBX1_38_17_curated
Ferric uptake regulator, Fur family
GWF2_RBX1_38_17_gwf2_scaffold_2719_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

3837..4715
DNA (879bp) protein (293aa)
id=24609977 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609977 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

4994..6136
DNA (1143bp) protein (381aa)
id=24609976 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609976 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6138..6842
DNA (705bp) protein (235aa)
yxlF_1; putative ABC transporter ATP-binding protein YxlF (EC:3.6.3.-)
ABC transporter, ATP-binding protein id=2171331 bin=GWE2_RBX1_39_32 species=unknown genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6845..7609
DNA (765bp) protein (255aa)
Putative ABC transport system, permease component id=2171333 bin=GWE2_RBX1_39_32 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
putative ABC transporter permease Tax=GWF2_RBX1_38_17_curated
putative ABC transporter permease
GWF2_RBX1_38_17_gwf2_scaffold_2719_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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7913..8743
DNA (831bp) protein (277aa)
Type II secretory pathway, component ExeA (Predicted ATPase) id=2171335 bin=GWE2_RBX1_39_32 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
general secretion pathway protein A Tax=GWF2_RBX1_38_17_curated
general secretion pathway protein A
GWF2_RBX1_38_17_gwf2_scaffold_2719_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

8746..11007
DNA (2262bp) protein (754aa)
capsular exopolysaccharide family (EC:2.7.10.2) Tax=GWF2_RBX1_38_17_curated
capsular exopolysaccharide family (EC:2.7.10.2)
Lipopolysaccharide biosynthesis id=3911061 bin=GWF2_OP9-related_38_17 species=Stanieria cyanosphaera genus=Stanieria taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_2719_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

11009..12076
DNA (1068bp) protein (356aa)
Polysaccharide export protein id=3911065 bin=GWF2_OP9-related_38_17 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
polysaccharide export protein; K01991 polysaccharide export outer membrane protein Tax=GWF2_RBX1_38_17_curated
polysaccharide export protein
GWF2_RBX1_38_17_gwf2_scaffold_2719_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

12073..13164
DNA (1092bp) protein (364aa)
Polysaccharide export protein id=2171341 bin=GWE2_RBX1_39_32 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
polysaccharide export protein; K01991 polysaccharide export outer membrane protein Tax=GWF2_RBX1_38_17_curated
polysaccharide export protein
GWF2_RBX1_38_17_gwf2_scaffold_2719_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

13620..15170
DNA (1551bp) protein (517aa)
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein id=24609969 bin=RAAC11 species=Shewanella benthica genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_2719_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

15167..16213
DNA (1047bp) protein (349aa)
uridine kinase; K00876 uridine kinase [EC:2.7.1.48] Tax=GWF2_RBX1_38_17_curated
Uridine kinase id=3911074 bin=GWF2_OP9-related_38_17 species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
uridine kinase
GWF2_RBX1_38_17_gwf2_scaffold_2719_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

16223..17626
DNA (1404bp) protein (468aa)
Putative uncharacterized protein id=2171347 bin=GWE2_RBX1_39_32 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Putative uncharacterized protein Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17681..18364)
DNA (684bp) protein (228aa)
id=2171349 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171349 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_19
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(18375..19526)
DNA (1152bp) protein (384aa)
id=2171350 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171350 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_20
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(19591..20658)
DNA (1068bp) protein (356aa)
id=2171351 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=2171351 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_21
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(20655..21386)
DNA (732bp) protein (244aa)
id=3911083 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=3911083 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_22
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(21422..22912)
DNA (1491bp) protein (497aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWF2_RBX1_38_17_curated
Apolipoprotein N-acyltransferase id=3911085 bin=GWF2_OP9-related_38_17 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
apolipoprotein N-acyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_2719_23
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(22912..23349)
DNA (438bp) protein (146aa)
Stage 0 sporulation protein F id=3911087 bin=GWF2_OP9-related_38_17 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
spo0F; stage 0 sporulation protein F; K02490 two-component system, response regulator, stage 0 sporulation protein F Tax=GWF2_RBX1_38_17_curated
spo0F; stage 0 sporulation protein F
GWF2_RBX1_38_17_gwf2_scaffold_2719_24
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23346..23486)
DNA (141bp) protein (47aa)
id=3911090 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=3911090 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_25
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(23468..23668)
DNA (201bp) protein (67aa)
id=3911091 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
id=3911091 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_2719_26
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

23869..24345
DNA (477bp) protein (159aa)
id=2127186 Tax=GWF2_RBX1_38_17_curated
id=2127186 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Displaying 26 items

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