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GWF2_RBX1_38_17_gwf2_scaffold_5506

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_5506_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

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comp(2..17908)
DNA (17907bp) protein (5969aa)
Sperm-activating peptides family id=4328221 bin=GWF2_OP9-related_38_17 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hemolysin-type calcium-binding region Tax=GWF2_RBX1_38_17_curated
hemolysin-type calcium-binding region
GWF2_RBX1_38_17_gwf2_scaffold_5506_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(17935..18345)
DNA (411bp) protein (137aa)
id=4328222 Tax=GWF2_RBX1_38_17_curated
id=4328222 bin=GWF2_OP9-related_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
GWF2_RBX1_38_17_gwf2_scaffold_5506_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

24530..24919
DNA (390bp) protein (130aa)
id=24609848 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24609848 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_5506_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(24926..26968)
DNA (2043bp) protein (681aa)
Protein translocase subunit SecA 2 id=4328225 bin=GWF2_OP9-related_38_17 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
secA; preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(26920..29076)
DNA (2157bp) protein (719aa)
Peptidase, M50 family id=4328226 bin=GWF2_OP9-related_38_17 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
M50 family peptidase Tax=GWF2_RBX1_38_17_curated
M50 family peptidase
GWF2_RBX1_38_17_gwf2_scaffold_5506_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(29083..30984)
DNA (1902bp) protein (634aa)
membrane-fusion protein-like protein Tax=GWF2_RBX1_38_17_curated
Membrane-fusion protein-like protein id=2044900 bin=GWD2_RBX1-related_39_127 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
membrane-fusion protein-like protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(30989..31831)
DNA (843bp) protein (281aa)
Membrane-fusion protein-like protein id=1768359 bin=GWE2_RBX1_39_32 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
membrane-fusion protein-like protein Tax=GWF2_RBX1_38_17_curated
membrane-fusion protein-like protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(31853..33283)
DNA (1431bp) protein (477aa)
Kelch repeats protein id=1768361 bin=GWE2_RBX1_39_32 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Kelch repeat-containing protein Tax=GWF2_RBX1_38_17_curated
Kelch repeat-containing protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(33530..35737)
DNA (2208bp) protein (736aa)
UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=GWF2_RBX1_38_17_curated
UvrD/REP helicase id=1768363 bin=GWE2_RBX1_39_32 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
UvrD/REP helicase
GWF2_RBX1_38_17_gwf2_scaffold_5506_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

36203..37243
DNA (1041bp) protein (347aa)
hypothetical protein PelgB_29681 id=1768365 bin=GWE2_RBX1_39_32 species=Paenibacillus elgii genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(37397..38548)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein id=1768367 bin=GWE2_RBX1_39_32 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_12
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(38789..39913)
DNA (1125bp) protein (375aa)
Filamentation induced by cAMP protein fic id=1768369 bin=GWE2_RBX1_39_32 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Filamentation induced by cAMP protein fic Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_5506_13
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(40382..40840)
DNA (459bp) protein (153aa)
Filamentation induced by cAMP protein Fic id=2044887 bin=GWD2_RBX1-related_39_127 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
filamentation induced by cAMP protein fic Tax=GWF2_RBX1_38_17_curated
filamentation induced by cAMP protein fic
GWF2_RBX1_38_17_gwf2_scaffold_5506_14
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(40840..41007)
DNA (168bp) protein (56aa)
id=1768373 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1768373 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_5506_15
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

41207..41482
DNA (276bp) protein (92aa)
Integrase catalytic region Tax=GWF2_RBX1_38_17_curated
Transposase id=1940641 bin=GWD2_RBX1-related_39_127 species=Synechocystis sp. PCC 6803 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
Integrase catalytic region
GWF2_RBX1_38_17_gwf2_scaffold_5506_16
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(41617..42639)
DNA (1023bp) protein (341aa)
Uncharacterized protein yhcG id=4328288 bin=GWF2_OP9-related_38_17 species=Capnocytophaga canimorsus genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
hypothetical protein Tax=GWF2_RBX1_38_17_curated
hypothetical protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_17
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(42655..43209)
DNA (555bp) protein (185aa)
SEC-C motif family protein id=1768376 bin=GWE2_RBX1_39_32 species=Natronococcus jeotgali genus=Natronococcus taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
SEC-C motif family protein Tax=GWF2_RBX1_38_17_curated
SEC-C motif family protein
GWF2_RBX1_38_17_gwf2_scaffold_5506_18
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(43236..43427)
DNA (192bp) protein (64aa)
id=1768377 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1768377 Tax=GWF2_RBX1_38_17_curated
Displaying 18 items

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