ggKbase home page

GWF2_RBX1_38_17_gwf2_scaffold_6023

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_38_17_gwf2_scaffold_6023_1
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

2..343
DNA (342bp) protein (114aa)
id=1795643 bin=GWD2_RBX1-related_39_127 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
id=1795643 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_6023_2
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

540..1685
DNA (1146bp) protein (382aa)
id=24610935 bin=RAAC11 tax=RAAC11 organism_group=Unknown_CP
id=24610935 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_6023_3
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(1701..2474)
DNA (774bp) protein (258aa)
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] id=24610936 bin=RAAC11 species=Desulfurispirillum indicum genus=Desulfurispirillum taxon_order=Chrysiogenales taxon_class=Chrysiogenetes phylum=Chrysiogenetes tax=RAAC11 organism_group=Unknown_CP
prolipoprotein diacylglyceryl transferase; K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=GWF2_RBX1_38_17_curated
prolipoprotein diacylglyceryl transferase
GWF2_RBX1_38_17_gwf2_scaffold_6023_4
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(2471..3898)
DNA (1428bp) protein (476aa)
RNA polymerase, sigma 54 subunit, RpoN id=1870876 bin=GWE2_RBX1_39_32 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=GWF2_RBX1_38_17_curated
RNA polymerase sigma 54 subunit RpoN
GWF2_RBX1_38_17_gwf2_scaffold_6023_5
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(3908..4945)
DNA (1038bp) protein (346aa)
id=1870877 bin=GWE2_RBX1_39_32 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
id=1870877 Tax=GWF2_RBX1_38_17_curated
GWF2_RBX1_38_17_gwf2_scaffold_6023_6
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5123..6529)
DNA (1407bp) protein (469aa)
protease Do (EC:3.4.21.108); K01362 [EC:3.4.21.-] Tax=GWF2_RBX1_38_17_curated
protease Do (EC:3.4.21.108)
Protease id=1795654 bin=GWD2_RBX1-related_39_127 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
GWF2_RBX1_38_17_gwf2_scaffold_6023_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

6714..7598
DNA (885bp) protein (295aa)
GTPase Era id=1870879 bin=GWE2_RBX1_39_32 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
Era, Era/TrmE family GTP-binding protein; K03595 GTP-binding protein Era Tax=GWF2_RBX1_38_17_curated
Era, Era/TrmE family GTP-binding protein
GWF2_RBX1_38_17_gwf2_scaffold_6023_8
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

7653..8996
DNA (1344bp) protein (448aa)
S-adenosylmethionine-dependent methyltransferase; K00599 [EC:2.1.1.-] Tax=GWF2_RBX1_38_17_curated
Uncharacterized RNA methyltransferase CA_C1435 id=4368349 bin=GWF2_OP9-related_38_17 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_OP9-related_38_17 organism_group=RBX1 organism_desc=Same as D2_39_127
S-adenosylmethionine-dependent methyltransferase
GWF2_RBX1_38_17_gwf2_scaffold_6023_9
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

9445..10566
DNA (1122bp) protein (374aa)
RNA polymerase sigma factor id=1795660 bin=GWD2_RBX1-related_39_127 species=Anaerobaculum mobile genus=Anaerobaculum taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWD2_RBX1-related_39_127 organism_group=RBX1 organism_desc=Same as F2_38_17
sigma-70 family RNA polymerase sigma factor Tax=GWF2_RBX1_38_17_curated
sigma-70 family RNA polymerase sigma factor
GWF2_RBX1_38_17_gwf2_scaffold_6023_10
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

10588..12081
DNA (1494bp) protein (498aa)
GlcD; FAD/FMN-containing dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15] Tax=GWF2_RBX1_38_17_curated
FAD linked oxidase, C-terminal domain protein id=1870922 bin=GWE2_RBX1_39_32 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWE2_RBX1_39_32 organism_group=RBX1 organism_desc=Based on recA, related to OP9; concatenated rp tree places basal to Cyanobacteria and Melainabacteria
GlcD; FAD/FMN-containing dehydrogenase
Displaying 10 items

View Taxonomy