ggKbase home page

GWF2_RBX1_related_35_9_gwf2_scaffold_4280

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_1
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(3..878)
DNA (876bp) protein (292aa)
carboxyl-terminal protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=GWF2_RBX1_35_9_curated
carboxy-terminal processing protease id=2095759 bin=GWB2_Bacteroidetes_32_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
carboxyl-terminal protease
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_2
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(898..1167)
DNA (270bp) protein (90aa)
deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=GWF2_RBX1_35_9_curated
CMP/dCMP deaminase zinc-binding protein id=4180426 bin=GWF2_OP9_related_35_9 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
CMP deaminase
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_3
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(1106..4012)
DNA (2907bp) protein (969aa)
id=4180427 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
id=4180427 Tax=GWF2_RBX1_35_9_curated
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_4
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(4152..5537)
DNA (1386bp) protein (462aa)
tRNA modification GTPase mnmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=GWF2_RBX1_35_9_curated
tRNA modification GTPase MnmE id=4180428 bin=GWF2_OP9_related_35_9 species=Cellulosilyticum lentocellum genus=Cellulosilyticum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
tRNA modification GTPase mnmE
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_5
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(5538..6071)
DNA (534bp) protein (178aa)
single-stranded nucleic acid binding R3H domain-containing protein id=4180429 bin=GWF2_OP9_related_35_9 species=Peptoniphilus rhinitidis genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=GWF2_RBX1_35_9_curated
single-stranded nucleic acid binding R3H domain-containing protein
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_6
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(6073..6744)
DNA (672bp) protein (224aa)
putative inner membrane protein translocase component YidC; K03217 preprotein translocase subunit YidC Tax=GWF2_RBX1_35_9_curated
Membrane protein insertase YidC id=4180430 bin=GWF2_OP9_related_35_9 species=Nautilia profundicola genus=Nautilia taxon_order=Nautiliales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
putative inner membrane protein translocase component YidC
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_7
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(7554..8363)
DNA (810bp) protein (270aa)
id=4180432 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
id=4180432 Tax=GWF2_RBX1_35_9_curated
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_8
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(8375..8830)
DNA (456bp) protein (152aa)
id=4180433 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
id=4180433 Tax=GWF2_RBX1_35_9_curated
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_trna_1
unknown

Not on your lists

8989..9067
DNA (79bp)
transferRNA
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_trna_2
unknown

Not on your lists

9169..9241
DNA (73bp)
transferRNA
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_9
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

9434..10000
DNA (567bp) protein (189aa)
Putative uncharacterized protein id=4180471 bin=GWF2_OP9_related_35_9 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
ribonuclease BN; K07058 membrane protein Tax=GWF2_RBX1_35_9_curated
ribonuclease BN
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_10
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

9987..10292
DNA (306bp) protein (102aa)
id=4180473 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
id=4180473 Tax=GWF2_RBX1_35_9_curated
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_11
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

10289..14482
DNA (4194bp) protein (1398aa)
id=4180474 Tax=GWF2_RBX1_35_9_curated
id=4180474 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_12
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

14460..16157
DNA (1698bp) protein (566aa)
surface antigen (D15); K07277 outer membrane protein Tax=GWF2_RBX1_35_9_curated
Surface antigen (D15) id=4180476 bin=GWF2_OP9_related_35_9 species=Halanaerobium praevalens genus=Halanaerobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
surface antigen (D15)
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_13
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

16402..16878
DNA (477bp) protein (159aa)
Putative uncharacterized protein id=4180478 bin=GWF2_OP9_related_35_9 species=Desulfohalobium retbaense genus=Desulfohalobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein Tax=GWF2_RBX1_35_9_curated
hypothetical protein
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_14
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(16997..17428)
DNA (432bp) protein (144aa)
Histone deacetylase superfamily id=4180480 bin=GWF2_OP9_related_35_9 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
deacetylase, histone deacetylase/acetoin utilization protein Tax=GWF2_RBX1_35_9_curated
deacetylase, histone deacetylase/acetoin utilization protein
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_15
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(17654..17944)
DNA (291bp) protein (97aa)
Histone deacetylase superfamily id=4180482 bin=GWF2_OP9_related_35_9 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
histone deacetylase superfamily protein Tax=GWF2_RBX1_35_9_curated
histone deacetylase superfamily protein
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_16
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(17945..18445)
DNA (501bp) protein (167aa)
GCN5-related N-acetyltransferase id=4180484 bin=GWF2_OP9_related_35_9 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
N-acetyltransferase GCN5 Tax=GWF2_RBX1_35_9_curated
N-acetyltransferase GCN5
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_17
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(18442..19434)
DNA (993bp) protein (331aa)
ATP-grasp enzyme, D-alanine-D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=GWF2_RBX1_35_9_curated
ATP-grasp enzyme, D-alanine-D-alanine ligase id=4180486 bin=GWF2_OP9_related_35_9 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
ATP-grasp enzyme, D-alanine-D-alanine ligase
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_18
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(19431..21761)
DNA (2331bp) protein (777aa)
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2); K01843 lysine 2,3-aminomutase [EC:5.4.3.2] Tax=GWF2_RBX1_35_9_curated
lysine 2,3-aminomutase YodO family protein (EC:5.4.3.2)
L-lysine 2,3-aminomutase id=4180488 bin=GWF2_OP9_related_35_9 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_19
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(21959..22828)
DNA (870bp) protein (290aa)
Band 7 protein id=4180490 bin=GWF2_OP9_related_35_9 species=Acetobacterium woodii genus=Acetobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein Tax=GWF2_RBX1_35_9_curated
hypothetical protein
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_20
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

23024..23392
DNA (369bp) protein (123aa)
Uncharacterized protein id=4180492 bin=GWF2_OP9_related_35_9 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein Tax=GWF2_RBX1_35_9_curated
hypothetical protein
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_21
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

23640..24137
DNA (498bp) protein (166aa)
id=4180496 bin=GWF2_OP9_related_35_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
id=4180496 Tax=GWF2_RBX1_35_9_curated
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_22
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

24293..25582
DNA (1290bp) protein (430aa)
Putative uncharacterized protein id=4180497 bin=GWF2_OP9_related_35_9 species=Natrialba aegyptia genus=Natrialba taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
hypothetical protein Tax=GWF2_RBX1_35_9_curated
hypothetical protein
GWF2_RBX1_related_35_9_gwf2_scaffold_4280_23
GWF2_RBX1_35_9_curated, RBX1, Bacteria

Not on your lists

comp(25624..26046)
DNA (423bp) protein (141aa)
Chemotaxis protein CheY id=4180500 bin=GWF2_OP9_related_35_9 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
cheY2; chemotaxis protein CheY; K03413 two-component system, chemotaxis family, response regulator CheY Tax=GWF2_RBX1_35_9_curated
response regulator receiver protein
Displaying 25 items

View Taxonomy