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gwf2_scaffold_1982

Alias: PER_GWF2_33_10_15

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_1982_1
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

1..192
DNA (192bp) protein (64aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HPS5_PARL1
excinuclease ABC subunit C; K07461 putative endonuclease Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
excinuclease ABC subunit C
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=63 evalue=2.2e-08 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
gwf2_scaffold_1982_2
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(372..1172)
DNA (801bp) protein (267aa)
Probable dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=4 Tax=Methanocaldococcus RepID=PYRK_METJA
dihydroorotate dehydrogenase electron transfer subunit; K02823 dihydroorotate dehydrogenase electron transfer subunit Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
dihydroorotate dehydrogenase electron transfer subunit
no description (db=Gene3D db_id=G3DSA:2.40.30.10 from=5 to=91 evalue=0.00061)
gwf2_scaffold_1982_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(1279..2196)
DNA (918bp) protein (306aa)
pyrD; dihydroorotate dehydrogenase PyrD (EC:1.3.98.1) Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQB6_9BACT
DHODEHASE_2 (db=PatternScan db_id=PS00912 from=240 to=260 evalue=0.0 interpro_id=IPR001295 interpro_description=Dihydroorotate dehydrogenase, conserved site GO=Molecular Function: dihydroorotate dehydrogenase activity (GO:0004152), Biological Process: 'de novo' pyrimidine base biosynthetic process (GO:0006207), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_1982_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

2257..2988
DNA (732bp) protein (244aa)
Putative membrane protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T3F1_9EURY
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
gwf2_scaffold_1982_5
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(3031..3777)
DNA (747bp) protein (249aa)
DSBA oxidoreductase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCB4_9ARCH
DSBA oxidoreductase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
DSBA oxidoreductase
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
gwf2_scaffold_1982_6
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(4201..4866)
DNA (666bp) protein (222aa)
id=5094613 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_1982_7
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(5064..5957)
DNA (894bp) protein (298aa)
pantothenate kinase; K09680 type II pantothenate kinase [EC:2.7.1.33] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7B5_KORCO
pantothenate kinase
seg (db=Seg db_id=seg from=138 to=156)
gwf2_scaffold_1982_8
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(5971..6933)
DNA (963bp) protein (321aa)
RNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=K0EQ56_ALTMB
RNA-directed DNA polymerase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
RNA-directed DNA polymerase
seg (db=Seg db_id=seg from=22 to=27)
gwf2_scaffold_1982_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

6995..7258
DNA (264bp) protein (88aa)
id=5094616 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_1982_10
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(7722..8765)
DNA (1044bp) protein (348aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38538.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=254 to=269)
gwf2_scaffold_1982_11
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

9017..11089
DNA (2073bp) protein (691aa)
hppA; pyrophosphate-energized proton pump; K15987 K(+)-stimulated pyrophosphate-energized sodium pump [EC:3.6.1.1] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZZ0_METPS rbh
hppA; pyrophosphate-energized proton pump
V_PPase: V-type H(+)-translocating pyrophosp (db=HMMTigr db_id=TIGR01104 from=3 to=690 evalue=0.0 interpro_id=IPR004131 interpro_description=Pyrophosphate-energised proton pump GO=Molecular Function: inorganic diphosphatase activity (GO:0004427), Molecular Function: hydrogen-translocating pyrophosphatase activity (GO:0009678), Biological Process: proton transport (GO:0015992), Cellular Component: membrane (GO:0016020))
gwf2_scaffold_1982_12
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

11206..11448
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP38540.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=59 to=70)
(db=HMMPfam db_id=PF11213 from=18 to=70 evalue=7.6e-05 interpro_id=IPR021377 interpro_description=Protein of unknown function DUF3006)
gwf2_scaffold_1982_13
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(11428..12360)
DNA (933bp) protein (311aa)
Malate dehydrogenase, malate dehydrogenase {ECO:0000313|EMBL:KKP38541.1}; EC=1.1.1.37 {ECO:0000313|EMBL:KKP38541.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria ba
Malate dehydrogenase n=1 Tax=Bacillus israeli RepID=MDH_BACIS rbh
malate dehydrogenase
no description (db=Gene3D db_id=G3DSA:3.90.110.10 from=142 to=305 evalue=1.2e-51 interpro_id=IPR015955 interpro_description=Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975), Molecular Function: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_1982_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

12540..12935
DNA (396bp) protein (132aa)
transmembrane_regions Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
gwf2_scaffold_1982_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

13000..14520
DNA (1521bp) protein (507aa)
id=5094622 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_1982_16
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists


comp(14456..15868)
DNA (1413bp) protein (471aa)
Glycine--tRNA ligase n=4 Tax=Thermoanaerobacterium RepID=D9TPP1_THETC rbh
glycyl-tRNA synthetase Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
glycyl-tRNA synthetase
seg (db=Seg db_id=seg from=118 to=129)
gwf2_scaffold_1982_17
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

16070..17281
DNA (1212bp) protein (404aa)
MgtE intracellular region n=1 Tax=Geobacter sp. (strain FRC-32) RepID=B9M3G5_GEOSF
MgtE integral membrane protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
MgtE integral membrane protein
(db=HMMPfam db_id=PF05239 from=2 to=32 evalue=0.0001 interpro_id=IPR007903 interpro_description=PRC-barrel)
gwf2_scaffold_1982_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

17317..18582
DNA (1266bp) protein (422aa)
Natural resistance-associated macrophage protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XIU1_CALS8 rbh
natural resistance-associated macrophage protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
natural resistance-associated macrophage protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=27)
gwf2_scaffold_1982_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(18610..19257)
DNA (648bp) protein (216aa)
id=5094626 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_1982_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(19336..20889)
DNA (1554bp) protein (518aa)
NlpC/P60 family protein n=2 Tax=Oribacterium RepID=J0LQ50_9FIRM
NLP/P60 protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
NLP/P60 protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
gwf2_scaffold_1982_21
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(20997..23522)
DNA (2526bp) protein (842aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS42_9BACT rbh
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
gwf2_scaffold_1982_22
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

23733..25148
DNA (1416bp) protein (472aa)
ABC-type sugar transport system, periplasmic component n=2 Tax=Mesotoga RepID=I2F3G7_9THEM
ABC-type sugar transport system, periplasmic component Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg (db=Seg db_id=seg from=10 to=22)
gwf2_scaffold_1982_23
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

25138..26475
DNA (1338bp) protein (446aa)
O-antigen ligase-related protein n=1 Tax=sediment metagenome RepID=D9PH45_9ZZZZ
O-antigen ligase-related protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=11 to=26)
gwf2_scaffold_1982_24
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(26388..27362)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A870_9FIRM
glycosyl transferase family protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
glycosyl transferase family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=266 to=283)
gwf2_scaffold_1982_25
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

27521..28375
DNA (855bp) protein (285aa)
Diacylglycerol kinase, catalytic domain Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
no description (db=HMMSmart db_id=SM00046 from=3 to=129 evalue=0.0012 interpro_id=IPR001206 interpro_description=Diacylglycerol kinase, catalytic domain GO=Molecular Function: diacylglycerol kinase activity (GO:0004143), Biological Process: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway (GO:0007205))
BMRU PROTEIN (db=HMMPanther db_id=PTHR12358:SF4 from=1 to=229 evalue=1.6e-23)
SPHINGOSINE KINASE (db=HMMPanther db_id=PTHR12358 from=1 to=229 evalue=1.6e-23)
gwf2_scaffold_1982_26
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

28459..29379
DNA (921bp) protein (307aa)
ABC transporter related protein n=2 Tax=Rhodothermus marinus RepID=D0MJJ6_RHOM4
ABC transporter, antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:KKP38554.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33
ABC transporter
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=224 evalue=1.0e-60)
gwf2_scaffold_1982_27
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

29545..30261
DNA (717bp) protein (239aa)
Predicted ABC transporter, permease protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N5P6_DESTT
ABC-type transport system, membrane protein, ABC-2 type transport system permease protein {ECO:0000313|EMBL:KKP38555.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria
ABC transporter permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_1982_28
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

30280..31749
DNA (1470bp) protein (490aa)
ABC transporter, periplasmic substrate-binding protein n=1 Tax=uncultured marine bacterium 159 RepID=Q6SHV6_9BACT
ABC transporter Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
ABC transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
gwf2_scaffold_1982_29
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

31759..32616
DNA (858bp) protein (286aa)
Putative uncharacterized protein n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXM9_HALOH
hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_1982_30
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(32645..33181)
DNA (537bp) protein (179aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QUL4_PERMH
no description (db=HMMSmart db_id=SM00479 from=15 to=178 evalue=1.6e-26 interpro_id=IPR006055 interpro_description=Exonuclease GO=Molecular Function: exonuclease activity (GO:0004527), Cellular Component: intracellular (GO:0005622))
Displaying items 1-30 of 41 in total

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