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gwf2_scaffold_3626

Alias: PER_GWF2_33_10_28

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_3626_1
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(1..6849)
DNA (6849bp) protein (2283aa)
Beta-1,4-xylanase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M263_CLOCD
Beta-1,4-xylanase {ECO:0000313|EMBL:KKP37633.1}; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
beta-1,4-xylanase
seg (db=Seg db_id=seg from=945 to=959)
gwf2_scaffold_3626_2
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(7232..7945)
DNA (714bp) protein (238aa)
GCN5-related N-acetyltransferase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWZ3_9CYAN
N-acetyltransferase GCN5 {ECO:0000313|EMBL:KKP37634.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
N-acetyltransferase GCN5
DIAMINE ACETYLTRANSFERASE 2 (db=HMMPanther db_id=PTHR10545:SF6 from=166 to=201 evalue=1.0e-06)
gwf2_scaffold_3626_3
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(8075..8554)
DNA (480bp) protein (160aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=39 to=53)
gwf2_scaffold_3626_4
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(8821..9081)
DNA (261bp) protein (87aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=18 to=30)
gwf2_scaffold_3626_5
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(9287..9574)
DNA (288bp) protein (96aa)
Excinuclease ABC, C subunit, N-terminal n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SPB3_9BRAD
excinuclease ABC subunit C; K07461 putative endonuclease Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
excinuclease ABC subunit C
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=3 to=92 evalue=1.2e-18 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
gwf2_scaffold_3626_6
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(9895..11103)
DNA (1209bp) protein (403aa)
PKD domain containing protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LW00_HALLT
PKD domain containing protein {ECO:0000313|EMBL:KKP37638.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
PKD domain containing protein
(db=HMMPfam db_id=PF08522 from=27 to=64 evalue=0.00021 interpro_id=IPR013728 interpro_description=Domain of unknown function DUF1735)
gwf2_scaffold_3626_7
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(11084..12085)
DNA (1002bp) protein (334aa)
Glycoside hydrolase, family 20, catalytic core n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3E8_HALMD
PKD domain containing protein {ECO:0000313|EMBL:KKP37639.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
hypothetical protein
seg (db=Seg db_id=seg from=7 to=23)
gwf2_scaffold_3626_8
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(12275..17932)
DNA (5658bp) protein (1886aa)
PDK repeat-containing protein n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GX37_9GAMM
PKD domain containing protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
PKD domain containing protein
seg (db=Seg db_id=seg from=209 to=230)
gwf2_scaffold_3626_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(18059..19009)
DNA (951bp) protein (317aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=3 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_3626_10
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(19035..19967)
DNA (933bp) protein (311aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=2 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
gwf2_scaffold_3626_11
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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20110..20301
DNA (192bp) protein (64aa)
Protein translocase complex, SecE/Sec61-gamma subunit Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
SECE_SEC61G (db=PatternScan db_id=PS01067 from=9 to=37 evalue=0.0 interpro_id=IPR001901 interpro_description=Protein translocase complex, SecE/Sec61-gamma subunit GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
(db=HMMPfam db_id=PF00584 from=6 to=60 evalue=1.6e-15 interpro_id=IPR001901 interpro_description=Protein translocase complex, SecE/Sec61-gamma subunit GO=Biological Process: protein targeting (GO:0006605), Biological Process: intracellular protein transport (GO:0006886), Cellular Component: membrane (GO:0016020))
gwf2_scaffold_3626_12
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

20357..21025
DNA (669bp) protein (223aa)
Transcription termination/antitermination protein nusG n=3 Tax=Desulfotomaculum RepID=F6B584_DESCC
NusG antitermination factor; K02601 transcriptional antiterminator NusG Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
NusG antitermination factor
seg (db=Seg db_id=seg from=6 to=20)
gwf2_scaffold_3626_13
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

21119..21787
DNA (669bp) protein (223aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=15 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
gwf2_scaffold_3626_14
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists


21804..22226
DNA (423bp) protein (141aa)
50S ribosomal protein L11 n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PSN8_9BACT
LSU ribosomal protein L11P Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
rplK; 50S ribosomal protein L11
RIBOSOMAL_L11 (db=PatternScan db_id=PS00359 from=126 to=140 evalue=0.0 interpro_id=IPR020785 interpro_description=Ribosomal protein L11, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
gwf2_scaffold_3626_15
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists


22327..23028
DNA (702bp) protein (234aa)
50S ribosomal protein L1 n=1 Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5F8_MARPK
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
50S ribosomal protein L1
RIBOSOMAL_L1 (db=PatternScan db_id=PS01199 from=121 to=139 evalue=0.0 interpro_id=IPR023673 interpro_description=Ribosomal protein L1, conserved site)
gwf2_scaffold_3626_16
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(23049..24686)
DNA (1638bp) protein (546aa)
Resolvase domain n=1 Tax=mine drainage metagenome RepID=E6QWS7_9ZZZZ rbh
Resolvase domain-containing protein {ECO:0000313|EMBL:KKP37648.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
resolvase domain-containing protein
coiled-coil (db=Coil db_id=coil from=21 to=49 evalue=NA)
gwf2_scaffold_3626_17
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(24866..25612)
DNA (747bp) protein (249aa)
coiled-coil Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
coiled-coil (db=Coil db_id=coil from=219 to=247 evalue=NA)
seg (db=Seg db_id=seg from=58 to=76)
gwf2_scaffold_3626_18
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(25617..26012)
DNA (396bp) protein (132aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=19 to=30)
gwf2_scaffold_3626_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(26023..26400)
DNA (378bp) protein (126aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=36 to=47)
gwf2_scaffold_3626_20
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(26466..27923)
DNA (1458bp) protein (486aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=140 to=154)
gwf2_scaffold_3626_21
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(27930..28094)
DNA (165bp) protein (55aa)
id=5094978 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_3626_22
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(28178..28360)
DNA (183bp) protein (61aa)
seg Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
seg (db=Seg db_id=seg from=27 to=38)
gwf2_scaffold_3626_23
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(28375..28659)
DNA (285bp) protein (95aa)
id=5094980 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_3626_24
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(28884..29495)
DNA (612bp) protein (204aa)
id=5094981 Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
gwf2_scaffold_3626_25
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(29441..30112)
DNA (672bp) protein (224aa)
MEROPS family M64 IgA peptidase n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ALL5_IGNAJ
MEROPS family M64 IgA peptidase {ECO:0000313|EMBL:KKP37657.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
MEROPS family M64 IgA peptidase
transmembrane_regions (db=TMHMM db_id=tmhmm from=200 to=222)
Displaying 25 items

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