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gwf2_scaffold_32480

Alias: PER_GWF2_33_10_47

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_32480_1
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(1..132)
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36278.1}; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=13 to=44 evalue=1.8e-07 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
(db=HMMPfam db_id=PF01541 from=15 to=43 evalue=2.6e-08 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
gwf2_scaffold_32480_2
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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502..1482
DNA (981bp) protein (327aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36279.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
(db=HMMPfam db_id=PF01551 from=80 to=145 evalue=9.0e-07 interpro_id=IPR016047 interpro_description=Peptidase M23)
gwf2_scaffold_32480_3
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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1593..1799
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36280.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
gwf2_scaffold_32480_4
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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1777..2220
DNA (444bp) protein (148aa)
GTPase EngC, ribosome biogenesis GTPase {ECO:0000313|EMBL:KKP36281.1}; EC=3.6.1.- {ECO:0000313|EMBL:KKP36281.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacter
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZRD7_MELRP
ribosome-associated GTPase
seg (db=Seg db_id=seg from=21 to=32)
gwf2_scaffold_32480_5
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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2352..2645
DNA (294bp) protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36282.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
seg (db=Seg db_id=seg from=62 to=73)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
gwf2_scaffold_32480_6
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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3366..4004
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NJN3_ROSCS
Uncharacterized protein {ECO:0000313|EMBL:KKP36283.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
hypothetical protein
gwf2_scaffold_32480_7
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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4001..4699
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYJ1_SPICH
Uncharacterized protein {ECO:0000313|EMBL:KKP36284.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
hypothetical protein
(db=HMMPfam db_id=PF08843 from=29 to=199 evalue=4.2e-23 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
gwf2_scaffold_32480_8
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

4842..5000
DNA (159bp) protein (53aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP36285.1}; Flags: Fragment;; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
Displaying 8 items

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