ggKbase home page

gwf2_scaffold_583

Alias: PER_GWF2_38_29_5

Search features with annotation key words

Displaying items 1-30 of 120 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_583_1
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

151..882
DNA (732bp) protein (244aa)
coiled-coil Tax=PER_GWF2_38_29
coiled-coil (db=Coil db_id=coil from=70 to=91 evalue=NA)
seg (db=Seg db_id=seg from=71 to=95)
gwf2_scaffold_583_2
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

968..1489
DNA (522bp) protein (174aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SRF7_CLOC7
N-acetyltransferase GCN5 Tax=PER_GWF2_38_29
N-acetyltransferase GCN5
seg (db=Seg db_id=seg from=85 to=102)
gwf2_scaffold_583_3
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

1774..2271
DNA (498bp) protein (166aa)
YbaK/proline--tRNA ligase associated domain protein n=3 Tax=Clostridium difficile RepID=G6B3G2_CLODI
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:KKQ68828.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
YbaK/prolyl-tRNA synthetase associated domain-containing protein
YbaK/ProRS associated domain (db=superfamily db_id=SSF55826 from=5 to=157 evalue=1.2e-27 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
gwf2_scaffold_583_4
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

2365..2541
DNA (177bp) protein (59aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_583_5
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

2531..3028
DNA (498bp) protein (166aa)
Citrate lyase synthetase n=1 Tax=Enterobacteriaceae bacterium (strain FGI 57) RepID=L0LXG6_ENTBF
Citrate lyase synthetase Tax=PER_GWF2_38_29
(db=HMMPfam db_id=PF00583 from=55 to=148 evalue=1.5e-06 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase (GNAT) domain GO=Molecular Function: N-acetyltransferase activity (GO:0008080))
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=48 to=158 evalue=2.9e-06 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
gwf2_scaffold_583_6
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

3111..3965
DNA (855bp) protein (285aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_583_7
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

3985..5616
DNA (1632bp) protein (544aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ68832.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
coiled-coil (db=Coil db_id=coil from=219 to=258 evalue=NA)
gwf2_scaffold_583_8
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

5762..6763
DNA (1002bp) protein (334aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADL7_THEID
RNA polymerase sigma factor, sigma-70 family Tax=PER_GWF2_38_29
RNA polymerase sigma factor, sigma-70 family
seg (db=Seg db_id=seg from=213 to=225)
gwf2_scaffold_583_9
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

6816..7679
DNA (864bp) protein (288aa)
TIGR00159 family protein n=1 Tax=Anaeroglobus geminatus F0357 RepID=G9YGT6_9FIRM
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
gwf2_scaffold_583_10
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

7676..8611
DNA (936bp) protein (312aa)
YbbR family protein n=1 Tax=Acetonema longum DSM 6540 RepID=F7NF45_9FIRM
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
gwf2_scaffold_583_11
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

8613..9710
DNA (1098bp) protein (366aa)
GTP-dependent translational factor YchF, putative n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A316_PELCD rbh
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=PER_GWF2_38_29
ychF; GTP-binding protein YchF
coiled-coil (db=Coil db_id=coil from=132 to=153 evalue=NA)
gwf2_scaffold_583_12
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(9707..12043)
DNA (2337bp) protein (779aa)
GTP pyrophosphokinase, GTP pyrophosphokinase {ECO:0000313|EMBL:KKQ68837.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KKQ68837.1};; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria b
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP pyrophosphokinase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3A9Z8_CARHZ rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=653 to=675)
gwf2_scaffold_583_13
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

12116..13204
DNA (1089bp) protein (363aa)
trmU; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=PER_GWF2_38_29
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.8.1.-)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDM4_9FIRM rbh
seg (db=Seg db_id=seg from=286 to=299)
gwf2_scaffold_583_14
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

13335..14327
DNA (993bp) protein (331aa)
sortase n=1 Tax=Clostridium arbusti SL206 RepID=UPI000288805C
srta; sortase Tax=PER_GWF2_38_29
sortase family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=102 to=121)
gwf2_scaffold_583_15
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(14324..14833)
DNA (510bp) protein (170aa)
Tetratricopeptide TPR_3 n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BIB3_CHLPD
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
coiled-coil (db=Coil db_id=coil from=93 to=125 evalue=NA)
gwf2_scaffold_583_16
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

14876..16903
DNA (2028bp) protein (676aa)
DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=PER_GWF2_38_29
DNA ligase, NAD-dependent (EC:6.5.1.2)
NAD-dependent DNA ligase LigA n=1 Tax=Bacillus sp. m3-13 RepID=UPI0001E89713 rbh
coiled-coil (db=Coil db_id=coil from=3 to=24 evalue=NA)
gwf2_scaffold_583_17
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(16905..18494)
DNA (1590bp) protein (530aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=PER_GWF2_38_29
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBX8_THET1 rbh
seg (db=Seg db_id=seg from=372 to=387)
gwf2_scaffold_583_18
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(18519..19610)
DNA (1092bp) protein (364aa)
Glycosyl transferase, group 1 n=3 Tax=Caldicellulosiruptor RepID=A4XMK6_CALS8
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKQ68843.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
glycosyl transferase group 1
GLYCOSYL TRANSFERASE (db=HMMPanther db_id=PTHR12526:SF21 from=2 to=360 evalue=1.5e-105)
gwf2_scaffold_583_19
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

19725..20105
DNA (381bp) protein (127aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_583_20
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(20095..21837)
DNA (1743bp) protein (581aa)
DNA polymerase IV, family X n=1 Tax=Sulfurovum sp. (strain NBC37-1) RepID=A6Q8Z2_SULNB rbh
family X DNA polymerase IV; K02347 DNA polymerase (family X) Tax=PER_GWF2_38_29
family X DNA polymerase IV
(db=HMMPfam db_id=PF02811 from=357 to=524 evalue=1.7e-15 interpro_id=IPR004013 interpro_description=PHP, C-terminal GO=Molecular Function: catalytic activity (GO:0003824))
gwf2_scaffold_583_21
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(21840..22964)
DNA (1125bp) protein (375aa)
Glycosyl transferase group 1 n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMZ9_9CHLR
AprM Tax=PER_GWF2_38_29
AprM
seg (db=Seg db_id=seg from=25 to=34)
gwf2_scaffold_583_22
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(22972..23697)
DNA (726bp) protein (242aa)
Predicted amidophosphoribosyltransferases n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RCE2_THETN
ComFC; amidophosphoribosyltransferase Tax=PER_GWF2_38_29
ComFC; amidophosphoribosyltransferase
PRTase-like (db=superfamily db_id=SSF53271 from=76 to=240 evalue=2.0e-17)
gwf2_scaffold_583_23
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(24198..24470)
DNA (273bp) protein (91aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_583_24
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(24483..25514)
DNA (1032bp) protein (344aa)
coiled-coil Tax=PER_GWF2_38_29
coiled-coil (db=Coil db_id=coil from=195 to=216 evalue=NA)
no description (db=HMMSmart db_id=SM00507 from=231 to=282 evalue=0.0046 interpro_id=IPR003615 interpro_description=HNH nuclease)
seg (db=Seg db_id=seg from=200 to=219)
gwf2_scaffold_583_25
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

25661..25882
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Oceanimonas sp. (strain GK1) RepID=H2FTV5_OCESG
hypothetical protein; K07090 Tax=PER_GWF2_38_29
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=26)
gwf2_scaffold_583_26
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(25827..26006)
DNA (180bp) protein (60aa)
transmembrane_regions Tax=PER_GWF2_38_29
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
gwf2_scaffold_583_27
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

26092..26421
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6DGC3_BACAZ
Uncharacterized protein {ECO:0000313|EMBL:KKQ68852.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=25)
gwf2_scaffold_583_28
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

comp(26447..28246)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=2 Tax=Ralstonia solanacearum RepID=Q8XUN4_RALSO
hypothetical protein Tax=PER_GWF2_38_29
hypothetical protein
coiled-coil (db=Coil db_id=coil from=532 to=553 evalue=NA)
gwf2_scaffold_583_29
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

28375..29049
DNA (675bp) protein (225aa)
Tax=PER_GWF2_38_29
gwf2_scaffold_583_30
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

29148..29615
DNA (468bp) protein (156aa)
transmembrane_regions Tax=PER_GWF2_38_29
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=89)
Displaying items 1-30 of 120 in total

View Taxonomy