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gwf2_scaffold_33

Alias: PER_GWF2_39_17_1

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Displaying items 1-30 of 206 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_33_1
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

196..1773
DNA (1578bp) protein (526aa)
Protein containing Fibronectin, type III domain n=1 Tax=sediment metagenome RepID=D9PMH2_9ZZZZ
PA14 domain-containing protein Tax=PER_GWF2_39_17
chitin-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
gwf2_scaffold_33_2
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

1856..2812
DNA (957bp) protein (319aa)
Hydrolase (Metallo-beta-lactamase superfamily)-like protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AW96_SYNWW
Metallo-beta-lactamase superfamily hydrolase-like protein {ECO:0000313|EMBL:KKR09164.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
metallo-beta-lactamase superfamily hydrolase-like protein
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=43 to=105 evalue=0.00024)
gwf2_scaffold_33_3
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(2952..3629)
DNA (678bp) protein (226aa)
Phosphatidic acid phosphatase type 2/haloperoxidase Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=61 to=78)
(db=HMMPfam db_id=PF01569 from=96 to=210 evalue=2.1e-15 interpro_id=IPR000326 interpro_description=Phosphatidic acid phosphatase type 2/haloperoxidase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: membrane (GO:0016020))
gwf2_scaffold_33_4
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(3754..4221)
DNA (468bp) protein (156aa)
Protein PsiE homolog n=131 Tax=Bacillus RepID=PSIE_BACAN
phosphate-starvation-inducible protein PsiE; K13256 protein PsiE Tax=PER_GWF2_39_17
phosphate starvation inducible protein psiE
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
gwf2_scaffold_33_5
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4311..5468)
DNA (1158bp) protein (386aa)
Putative permease n=2 Tax=Grimontia RepID=D0I871_VIBHO
membrane protein Tax=PER_GWF2_39_17
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=65)
gwf2_scaffold_33_6
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

5637..6224
DNA (588bp) protein (196aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=28 to=40)
gwf2_scaffold_33_7
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(6257..8605)
DNA (2349bp) protein (783aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129); K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129] Tax=PER_GWF2_39_17
Penicillin-binding protein 2B n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XD95_9FIRM
Penicillin-binding protein, transpeptidase protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
gwf2_scaffold_33_8
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8618..11089)
DNA (2472bp) protein (824aa)
UPI0002481ABF related cluster n=1 Tax=unknown RepID=UPI0002481ABF rbh
hypothetical protein Tax=PER_GWF2_39_17
secreted protein with C-terminal beta-propeller domain
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
gwf2_scaffold_33_9
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

11171..12436
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Dehalobacter RepID=K4KVJ8_9FIRM
peptidase M16 domain-containing protein Tax=PER_GWF2_39_17
zinc protease
coiled-coil (db=Coil db_id=coil from=308 to=329 evalue=NA)
gwf2_scaffold_33_10
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

12567..13178
DNA (612bp) protein (204aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=127 to=138)
gwf2_scaffold_33_11
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

13207..13959
DNA (753bp) protein (251aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
seg (db=Seg db_id=seg from=25 to=35)
gwf2_scaffold_33_12
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(13968..15989)
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase PcrA (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=PER_GWF2_39_17
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
UPI0002196D40 related cluster n=1 Tax=unknown RepID=UPI0002196D40
seg (db=Seg db_id=seg from=153 to=164)
gwf2_scaffold_33_13
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

Not on your lists

16248..16571
DNA (324bp) protein (108aa)
RNP-1 like RNA-binding protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRV6_9BACT
RNA-binding protein (RRM domain) {ECO:0000313|EMBL:KKR24619.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
RNA-binding protein
seg (db=Seg db_id=seg from=80 to=100)
gwf2_scaffold_33_14
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

16701..17438
DNA (738bp) protein (246aa)
S-adenosyl-L-methionine-dependent methyltransferases Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=9 to=25)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=76 to=245 evalue=3.4e-07)
gwf2_scaffold_33_15
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(17517..17861)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZSW6_9PLAN
cupin Tax=PER_GWF2_39_17
hypothetical protein
(db=HMMPfam db_id=PF07883 from=41 to=109 evalue=3.7e-15 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
gwf2_scaffold_33_16
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(17928..18815)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Petrotoga mobilis (strain DSM 10674 / SJ95) RepID=A9BHH4_PETMO rbh
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=91)
gwf2_scaffold_33_17
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(18895..19206)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3B9_SPICH
hypothetical protein Tax=PER_GWF2_39_17
hypothetical protein
gwf2_scaffold_33_18
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists


comp(19437..21191)
DNA (1755bp) protein (585aa)
arginyl-tRNA synthetase; K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=PER_GWF2_39_17
arginyl-tRNA synthetase n=1 Tax=Mesoflavibacter zeaxanthinifaciens S86 RepID=UPI000255B9F1 rbh
arginyl-tRNA synthetase
AA_TRNA_LIGASE_I (db=PatternScan db_id=PS00178 from=124 to=135 evalue=0.0 interpro_id=IPR001412 interpro_description=Aminoacyl-tRNA synthetase, class I, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: tRNA aminoacylation for protein translation (GO:0006418))
gwf2_scaffold_33_19
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

21307..22563
DNA (1257bp) protein (419aa)
Integral membrane protein with CBS domains n=11 Tax=Clostridium perfringens RepID=B1V2X6_CLOPF rbh
Transporter {ECO:0000313|EMBL:KKR09181.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_39_17.;"
transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwf2_scaffold_33_20
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(22547..23575)
DNA (1029bp) protein (343aa)
putative tRNA-dihydrouridine synthase (EC:1.-.-.-) Tax=PER_GWF2_39_17
putative tRNA-dihydrouridine synthase (EC:1.-.-.-)
Dihydrouridine synthase DuS n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TL86_9CHLR rbh
UPF0034 (db=PatternScan db_id=PS01136 from=96 to=114 evalue=0.0 interpro_id=IPR018517 interpro_description=tRNA-dihydrouridine synthase, conserved site GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA dihydrouridine synthase activity (GO:0017150), Molecular Function: flavin adenine dinucleotide binding (GO:0050660), Biological Process: oxidation-reduction process (GO:0055114))
gwf2_scaffold_33_21
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

23667..24281
DNA (615bp) protein (205aa)
Maf-like protein N47_C19110 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YB12_9DELT
maf protein; K06287 septum formation protein Tax=PER_GWF2_39_17
maf; septum formation protein Maf
maf: septum formation protein Maf (db=HMMTigr db_id=TIGR00172 from=7 to=190 evalue=1.7e-56 interpro_id=IPR003697 interpro_description=Maf-like protein GO=Cellular Component: cytoplasm (GO:0005737))
gwf2_scaffold_33_22
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(24271..26643)
DNA (2373bp) protein (791aa)
pcrA; ATP-dependent DNA helicase (EC:3.6.1.-); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=PER_GWF2_39_17
pcrA; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=4 Tax=Brevibacillus RepID=C0Z4D5_BREBN rbh
seg (db=Seg db_id=seg from=632 to=645)
gwf2_scaffold_33_23
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

26806..28035
DNA (1230bp) protein (410aa)
coiled-coil Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=92 to=113 evalue=NA)
seg (db=Seg db_id=seg from=231 to=247)
gwf2_scaffold_33_24
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(28095..29267)
DNA (1173bp) protein (391aa)
L,D-transpeptidase catalytic domain Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
(db=HMMPfam db_id=PF03734 from=264 to=387 evalue=2.7e-13 interpro_id=IPR005490 interpro_description=L,D-transpeptidase catalytic domain GO=Molecular Function: transferase activity (GO:0016740))
L,D-transpeptidase catalytic domain-like (db=superfamily db_id=SSF141523 from=260 to=389 evalue=3.9e-24)
gwf2_scaffold_33_25
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(29514..29789)
DNA (276bp) protein (92aa)
Transcriptional dual regulator HU-alpha n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAC2_9BACT
Transcriptional dual regulator HU-alpha, DNA-binding protein HU-beta {ECO:0000313|EMBL:KKR09187.1}; TaxID=1619067 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF
hupA; transcriptional dual regulator HU-alpha
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
gwf2_scaffold_33_26
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

30020..32266
DNA (2247bp) protein (749aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=PER_GWF2_39_17
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K217_DESAC rbh
topA_bact: DNA topoisomerase I (db=HMMTigr db_id=TIGR01051 from=5 to=619 evalue=0.0 interpro_id=IPR005733 interpro_description=DNA topoisomerase I, bacterial-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
gwf2_scaffold_33_27
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

32395..32610
DNA (216bp) protein (72aa)
transmembrane_regions Tax=PER_GWF2_39_17
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
gwf2_scaffold_33_28
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

comp(32671..37032)
DNA (4362bp) protein (1454aa)
P-loop containing nucleoside triphosphate hydrolases Tax=PER_GWF2_39_17
coiled-coil (db=Coil db_id=coil from=1094 to=1115 evalue=NA)
seg (db=Seg db_id=seg from=52 to=65)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=568 to=852 evalue=1.6e-08)
gwf2_scaffold_33_29
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

37130..37276
DNA (147bp) protein (49aa)
seg Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=33 to=43)
gwf2_scaffold_33_30
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

37260..41045
DNA (3786bp) protein (1262aa)
APHP Tax=PER_GWF2_39_17
seg (db=Seg db_id=seg from=15 to=32)
(db=HMMPfam db_id=PF07705 from=568 to=669 evalue=4.9e-06 interpro_id=IPR011635 interpro_description=APHP)
Displaying items 1-30 of 206 in total

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