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gwf2_scaffold_2732_13

Organism: PER_GWF2_39_17

near complete RP 50 / 55 MC: 9 BSCG 49 / 51 MC: 1 ASCG 11 / 38
Location: comp(10309..10851)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=13 Tax=Bacillus RepID=D5TSL1_BACT1 similarity UNIREF
DB: UNIREF90
  • Identity: 35.0
  • Coverage: 0.0
  • Bit_score: 106
  • Evalue 7.00e+00
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=PER_GWF2_39_17 UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 365
  • Evalue 5.00e-98
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 175.0
  • Bit_score: 107
  • Evalue 4.90e-21

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Taxonomy

PER_GWF2_39_17 → Peregrinibacteria → Bacteria

Sequences

DNA sequence
Length: 543
TTGAAAGAAAACCCTGATCTTAATTTAATTAAACTTTACCTTGATACCCAGGATGAAATAGCTCTCCGTACGCTTCTCGATAAATATGTCCAGCTAGGTTTCTCGGTAATTTACCGCATTGTCGGCAACAAAGAAGATGCCGAAGATGCTTTACAAGAAGCCCTTATCAAGGTGATAAATGGCCTAAAAAACTTCAAAATGGAGTCCAGCTTTAAAACCTGGTTCTGTAAAATTTGTTACCATGAAGGCATTAATCATTATCAAAAATTTAAAAATAAACAAACTATCGATCTTGAGGATGTGGCGTATGAACTAAAAGACAGCCAATCTGTAGCAGATGACGTGGAACAAAATATGGAAAAAAATCATATCTGGGGTTGCGTGGATCAACTCGATGAAAAATACCGAACCGTCCTACTTGCTTTCTACCAAAATGAATTTTCAATCAAAGAAATAGCGGAAATGATGGGTCTCAACGAAAATACTATTAAAACTCATCTCTCAAGGGCAAAAGATCAATTAAAAGAAAAATTAAATACCTAA
PROTEIN sequence
Length: 181
LKENPDLNLIKLYLDTQDEIALRTLLDKYVQLGFSVIYRIVGNKEDAEDALQEALIKVINGLKNFKMESSFKTWFCKICYHEGINHYQKFKNKQTIDLEDVAYELKDSQSVADDVEQNMEKNHIWGCVDQLDEKYRTVLLAFYQNEFSIKEIAEMMGLNENTIKTHLSRAKDQLKEKLNT*