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gwf2_scaffold_2732_13 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
RNA polymerase ECF-type sigma factor n=13 Tax=Bacillus RepID=D5TSL1_BACT1 similarity UNIREF
DB: UNIREF90
35.0 0.0 106 7.00e+00 btb:BMB171_C0915
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=PER_GWF2_39_17 UNIPROT
DB: UniProtKB
100.0 180.0 365 5.00e-98 ggdbv1_5097593
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
35.4 175.0 107 4.90e-21 btb:BMB171_C0915
(db=HMMPfam db_id=PF08281 from=125 to=174 evalue=1.4e-15 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 btb:BMB171_C0915
(db=HMMPfam db_id=PF04542 from=26 to=89 evalue=1.4e-11 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMPfam
0.0 0.0 0 1.00e+00 btb:BMB171_C0915
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=20 to=178 evalue=1.0e-40 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 iprscan interpro
DB: HMMTigr
0.0 0.0 0 1.00e+00 btb:BMB171_C0915
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=110 evalue=1.8e-17 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto iprscan interpro
DB: superfamily
0.0 0.0 0 1.00e+00 btb:BMB171_C0915
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=16 to=95 evalue=2.7e-14) iprscan interpro
DB: Gene3D
0.0 0.0 0 2.00e+00 btb:BMB171_C0915
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=116 to=180 evalue=2.3e-16 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct iprscan interpro
DB: superfamily
0.0 0.0 0 2.00e+00 btb:BMB171_C0915