Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
---|---|---|---|---|---|---|---|
RNA polymerase ECF-type sigma factor n=13 Tax=Bacillus RepID=D5TSL1_BACT1 | similarity |
UNIREF
DB: UNIREF90 |
35.0 | 0.0 | 106 | 7.00e+00 | btb:BMB171_C0915 |
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=PER_GWF2_39_17 |
UNIPROT
DB: UniProtKB |
100.0 | 180.0 | 365 | 5.00e-98 | ggdbv1_5097593 | |
RNA polymerase ECF-type sigma factor | similarity |
KEGG
DB: KEGG |
35.4 | 175.0 | 107 | 4.90e-21 | btb:BMB171_C0915 |
(db=HMMPfam db_id=PF08281 from=125 to=174 evalue=1.4e-15 interpro_id=IPR013249 interpro_description=RNA polymerase sigma factor 70, region 4 type 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | btb:BMB171_C0915 |
(db=HMMPfam db_id=PF04542 from=26 to=89 evalue=1.4e-11 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
0.0 | 0.0 | 0 | 1.00e+00 | btb:BMB171_C0915 |
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=20 to=178 evalue=1.0e-40 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
0.0 | 0.0 | 0 | 1.00e+00 | btb:BMB171_C0915 |
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=1 to=110 evalue=1.8e-17 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma facto | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 1.00e+00 | btb:BMB171_C0915 |
no description (db=Gene3D db_id=G3DSA:1.10.1740.10 from=16 to=95 evalue=2.7e-14) | iprscan |
interpro
DB: Gene3D |
0.0 | 0.0 | 0 | 2.00e+00 | btb:BMB171_C0915 |
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=116 to=180 evalue=2.3e-16 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
0.0 | 0.0 | 0 | 2.00e+00 | btb:BMB171_C0915 |