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gwf2_scaffold_1077

Alias: PER_GWF2_43_18_7

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_1077_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

gwf2_scaffold_1077_2
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(52..450)
DNA (399bp) protein (133aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_1077_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(741..1112)
DNA (372bp) protein (124aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_1077_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(1114..1782)
DNA (669bp) protein (223aa)
Mucin n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PPE1_DICFS
Mucin Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=12 to=28)
gwf2_scaffold_1077_5
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(1854..7133)
DNA (5280bp) protein (1760aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=21 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=888 to=910)
coiled-coil (db=Coil db_id=coil from=607 to=628 evalue=NA)
gwf2_scaffold_1077_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(7082..7747)
DNA (666bp) protein (222aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_1077_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(7789..8022)
DNA (234bp) protein (78aa)
coiled-coil Tax=PER_GWF2_43_17
coiled-coil (db=Coil db_id=coil from=1 to=22 evalue=NA)
gwf2_scaffold_1077_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(8264..9907)
DNA (1644bp) protein (548aa)
Protein of unknown function DUF3352 Tax=PER_GWF2_43_17
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
(db=HMMPfam db_id=PF11832 from=4 to=219 evalue=7.6e-07 interpro_id=IPR021787 interpro_description=Protein of unknown function DUF3352)
gwf2_scaffold_1077_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(9930..10661)
DNA (732bp) protein (244aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=6 to=20)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=6.0)
gwf2_scaffold_1077_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

10976..11113
DNA (138bp) protein (46aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_1077_11
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

11110..12288
DNA (1179bp) protein (393aa)
Glutaredoxin n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AIA7_SEBTE rbh
glutaredoxin Tax=PER_GWF2_43_17
glutaredoxin
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192)
gwf2_scaffold_1077_12
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(12391..12579)
DNA (189bp) protein (63aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=21 to=62)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=6.0)
gwf2_scaffold_1077_13
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

12706..13152
DNA (447bp) protein (149aa)
SsrA-binding protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P9E4_DEFDS
smpB; ssrA RNA (tmRNA)-binding protein; K03664 SsrA-binding protein Tax=PER_GWF2_43_17
smpB; ssrA RNA (tmRNA)-binding protein
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=2 to=144 evalue=1.2e-54 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723))
gwf2_scaffold_1077_14
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

13159..13965
DNA (807bp) protein (269aa)
NAD+ synthetase (EC:6.3.1.5); K01916 NAD+ synthase [EC:6.3.1.5] Tax=PER_GWF2_43_17
NAD+ synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VT29_METIM
seg (db=Seg db_id=seg from=6 to=17)
gwf2_scaffold_1077_15
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

13967..14488
DNA (522bp) protein (174aa)
Nicotinamide-nucleotide adenylyltransferase, nicotinamide-nucleotide adenylyltransferase {ECO:0000313|EMBL:KKT01901.1}; EC=2.7.7.1 {ECO:0000313|EMBL:KKT01901.1};; TaxID=1619068 species="Bacteria; Pere
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TCG2_METSL
(db=HMMPfam db_id=PF01467 from=5 to=135 evalue=1.7e-15 interpro_id=IPR004820 interpro_description=Cytidylyltransferase GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: nucleotidyltransferase activity (GO:0016779))
gwf2_scaffold_1077_16
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

14490..15890
DNA (1401bp) protein (467aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=PER_GWF2_43_17
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VGH6_CLOAI rbh
seg (db=Seg db_id=seg from=234 to=250)
gwf2_scaffold_1077_17
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(16225..18528)
DNA (2304bp) protein (768aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=88 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwf2_scaffold_1077_18
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(18588..20771)
DNA (2184bp) protein (728aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=PER_GWF2_43_17
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase n=2 Tax=Geobacter RepID=A5G7S4_GEOUR rbh
seg (db=Seg db_id=seg from=62 to=73)
gwf2_scaffold_1077_19
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

21167..21442
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=2 Tax=Bacillus RepID=D6XVA5_BACIE
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta Tax=PER_GWF2_43_17
hup; DNA-binding protein HU
no description (db=HMMSmart db_id=SM00411 from=1 to=91 evalue=1.1e-30 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
gwf2_scaffold_1077_20
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists


21579..22622
DNA (1044bp) protein (348aa)
Phenylalanyl-tRNA synthetase subunit alpha, phenylalanyl-tRNA synthetase alpha chain {ECO:0000313|EMBL:KKT01906.1}; EC=6.1.1.20 {ECO:0000313|EMBL:KKT01906.1};; TaxID=1619068 species="Bacteria; Peregri
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Clostridium RepID=B8I1X0_CLOCE rbh
pheS; phenylalanyl-tRNA synthetase subunit alpha
seg (db=Seg db_id=seg from=79 to=92)
gwf2_scaffold_1077_21
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

22642..25044
DNA (2403bp) protein (801aa)
Phenylalanyl-tRNA synthetase subunit beta, phenylalanyl-tRNA synthetase beta chain {ECO:0000313|EMBL:KKT01907.1}; EC=6.1.1.20 {ECO:0000313|EMBL:KKT01907.1};; TaxID=1619068 species="Bacteria; Peregrini
pheT; phenylalanine--tRNA ligase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium pasteurianum DSM 525 RepID=L7ELA0_CLOPA rbh
no description (db=HMMSmart db_id=SM00873 from=226 to=398 evalue=1.1e-70 interpro_id=IPR005146 interpro_description=B3/B4 tRNA-binding domain GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826))
gwf2_scaffold_1077_22
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(25082..25666)
DNA (585bp) protein (195aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT01908.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
seg (db=Seg db_id=seg from=20 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
gwf2_scaffold_1077_23
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

25894..28542
DNA (2649bp) protein (883aa)
Penicillin-binding protein n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N2S6_ANATU rbh
penicillin-binding protein Tax=PER_GWF2_43_17
penicillin-binding protein
seg (db=Seg db_id=seg from=20 to=37)
gwf2_scaffold_1077_24
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(28548..29699)
DNA (1152bp) protein (384aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] Tax=PER_GWF2_43_17
Non-canonical purine NTP pyrophosphatase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CD51_THET1
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
seg (db=Seg db_id=seg from=145 to=157)
gwf2_scaffold_1077_25
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

29742..31052
DNA (1311bp) protein (437aa)
O-antigen polymerase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I219_CALAS
O-antigen polymerase family protein Tax=PER_GWF2_43_17
O-antigen polymerase
seg (db=Seg db_id=seg from=76 to=92)
gwf2_scaffold_1077_26
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(31006..31848)
DNA (843bp) protein (281aa)
Transcriptional regulator TrmB n=1 Tax=Celeribacter baekdonensis B30 RepID=K2K127_9RHOB
transcriptional regulator TrmB Tax=PER_GWF2_43_17
Transcriptional regulator, TrmB
coiled-coil (db=Coil db_id=coil from=78 to=106 evalue=NA)
gwf2_scaffold_1077_27
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(31859..32053)
DNA (195bp) protein (65aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=31 to=43)
gwf2_scaffold_1077_28
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(32044..33963)
DNA (1920bp) protein (640aa)
(p)ppgpp synthetase i, spot/rela (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=PER_GWF2_43_17
(p)ppgpp synthetase i, spot/rela (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A281_MAHA5
no description (db=HMMSmart db_id=SM00471 from=44 to=157 evalue=1.5e-08 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
gwf2_scaffold_1077_29
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(34015..34848)
DNA (834bp) protein (278aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_1077_30
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(34975..36861)
DNA (1887bp) protein (629aa)
coiled-coil Tax=PER_GWF2_43_17
coiled-coil (db=Coil db_id=coil from=151 to=172 evalue=NA)
Displaying items 1-30 of 82 in total

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