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gwf2_scaffold_8785

Alias: PER_GWF2_43_18_15

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
gwf2_scaffold_8785_1
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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3..1325
DNA (1323bp) protein (441aa)
DNA internalization-related competence protein ComEC/Rec2 n=5 Tax=Dehalococcoides mccartyi RepID=A5FP78_DEHSB
Internalization competence protein, competence protein ComEC protein {ECO:0000313|EMBL:KKT01434.1}; Flags: Fragment;; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria ba
comEC; DNA internalization competence protein
seg (db=Seg db_id=seg from=190 to=200)
gwf2_scaffold_8785_2
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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comp(1470..2003)
DNA (534bp) protein (178aa)
Putative RNA methylase n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L2S9_THEU7
Uncharacterized protein {ECO:0000313|EMBL:KKT19943.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
putative RNA methylase
seg (db=Seg db_id=seg from=8 to=28)
gwf2_scaffold_8785_3
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

2108..2446
DNA (339bp) protein (113aa)
seg Tax=PER_GWF2_43_17
seg (db=Seg db_id=seg from=83 to=96)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
gwf2_scaffold_8785_4
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(2624..2827)
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT01437.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
gwf2_scaffold_8785_5
Peregrinibacteria bacterium GW2011_GWA2_43_8, Peregrinibacteria, Bacteria

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2998..4023
DNA (1026bp) protein (342aa)
Deoxycytidylate deaminase n=4 Tax=Geobacter RepID=Q39V71_GEOMG
Uncharacterized protein {ECO:0000313|EMBL:KKT19945.1}; TaxID=1619056 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_43_8.;"
hypothetical protein
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=266 to=301 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
gwf2_scaffold_8785_6
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(4032..4643)
DNA (612bp) protein (204aa)
Ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
Pseudouridine synthase n=14 Tax=Treponema denticola RepID=Q73NR9_TREDE
ribosomal large subunit pseudouridine synthase D Tax=PER_GWF2_43_17
PSI_RLU (db=PatternScan db_id=PS01129 from=58 to=72 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
gwf2_scaffold_8785_7
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

4880..5440
DNA (561bp) protein (187aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_8785_8
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

comp(5578..5820)
DNA (243bp) protein (81aa)
Tax=PER_GWF2_43_17
gwf2_scaffold_8785_9
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

5881..6318
DNA (438bp) protein (146aa)
RNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=K0EQ56_ALTMB
Phage-encoded reverse transcriptase {ECO:0000313|EMBL:KKT01442.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
RNA-directed DNA polymerase
gwf2_scaffold_8785_10
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

6622..7572
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=uncultured Chloroflexi bacterium RepID=Q2Z015_9CHLR
hypothetical protein Tax=PER_GWF2_43_17
hypothetical protein
seg (db=Seg db_id=seg from=16 to=30)
gwf2_scaffold_8785_11
PER_GWF2_43_17, Peregrinibacteria, Bacteria

Not on your lists

7710..9005
DNA (1296bp) protein (432aa)
Asparaginyl-tRNA synthetase, asparaginyl-tRNA synthetase {ECO:0000313|EMBL:KKT01444.1}; EC=6.1.1.22 {ECO:0000313|EMBL:KKT01444.1};; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregr
Asparagine--tRNA ligase n=1 Tax=Cloacamonas acidaminovorans (strain Evry) RepID=B0VGZ6_CLOAI rbh
asparaginyl-tRNA synthetase
seg (db=Seg db_id=seg from=46 to=56)
Displaying 11 items

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