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S34_3B_scaffold_40424

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S34_3B_scaffold_40424_1
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

223..987
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN32290.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Uncharacterized protein id=2250259 bin=GWB2_CP_45_9 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
S34_3B_scaffold_40424_2
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1205..1984
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IK01_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62046.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
S34_3B_scaffold_40424_3
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

2295..2636
DNA (342bp) protein (114aa)
Uncharacterized protein id=4216657 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
S34_3B_scaffold_40424_4
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(2863..4791)
DNA (1929bp) protein (643aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein id=1970876 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
S34_3B_scaffold_40424_5
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(4810..5304)
DNA (495bp) protein (165aa)
Cell shape determining protein MreD id=1970878 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
rod shape-determining protein MreD
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
S34_3B_scaffold_40424_6
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(5369..6199)
DNA (831bp) protein (277aa)
Cell shape-determining protein MreC id=4918603 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
rod shape-determining protein MreC
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
S34_3B_scaffold_40424_7
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(6180..7235)
DNA (1056bp) protein (352aa)
Cell shape determining protein MreB id=1970884 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
mreB; rod shape-determining protein MreB
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
S34_3B_scaffold_40424_8
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

comp(7331..8962)
DNA (1632bp) protein (544aa)
Apolipoprotein N-acyltransferase id=1970887 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
apolipoprotein N-acyltransferase
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
S34_3B_scaffold_40424_9
R_Planctomycetes_38_41, Planctomycetes, Bacteria

Not on your lists

9033..9860
DNA (828bp) protein (276aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 id=4918606 bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=RIFCSPHIGHO2_02_FULL_Planctomycetes_38_41_curated
S34_3B_scaffold_40424_10
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

Not on your lists

10216..11199
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0CYW8_9BACL
hypothetical protein
Tax=RBG_16_Zixibacteria_43_9_curated
S34_3B_scaffold_40424_11
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

11215..11517
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI00036F106E
Tax=CG_Nitrosp_02
S34_3B_scaffold_40424_12
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(11623..12816)
DNA (1194bp) protein (398aa)
Putative flavoprotein id=3795694 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
putative flavoprotein
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
S34_3B_scaffold_40424_13
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

comp(12860..13351)
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit id=3795693 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
3-isopropylmalate dehydratase small subunit
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
S34_3B_scaffold_40424_14
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13351..17622)
DNA (4272bp) protein (1424aa)
Putative CoA enzyme activase n=1 Tax=planctomycete KSU-1 RepID=I3IIH5_9PLAN
(R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein {ECO:0000313|EMBL:GAN33111.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
CoA-substrate-specific enzyme activase
S34_3B_scaffold_40424_15
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17697..18965)
DNA (1269bp) protein (423aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit id=3866792 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
S34_3B_scaffold_40424_16
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(19111..19425)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN33109.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Uncharacterized protein id=3866790 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
hypothetical protein
S34_3B_scaffold_40424_17
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

Not on your lists

comp(19593..20438)
DNA (846bp) protein (282aa)
endopeptidase htpX (EC:3.4.24.-)
Protease HtpX homolog id=3499591 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
Tax=RifOxyB12_full_Planctomycetes_42_10_curated
S34_3B_scaffold_40424_18
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

comp(20634..21968)
DNA (1335bp) protein (445aa)
threonine synthase (EC:4.2.3.1)
Threonine synthase id=3866786 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Tax=GWB2_Planctomycetes_41_19_curated
S34_3B_scaffold_40424_19
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

22143..22556
DNA (414bp) protein (138aa)
Putative uncharacterized protein id=3499600 bin=GWA2_Planctomycete_KSU_39_15 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
S34_3B_scaffold_40424_20
RLO_Planctomycetes_39_13, Planctomycetes, Bacteria

Not on your lists

22682..24469
DNA (1788bp) protein (596aa)
Uncharacterized protein id=3499603 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Planctomycetes_39_13_curated
S34_3B_scaffold_40424_21
GWB2_Planctomycetes_41_19_curated, Brocadiales, Planctomycetes, Bacteria

Not on your lists

24620..25744
DNA (1125bp) protein (375aa)
Uncharacterized protein id=3499607 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
Tax=GWB2_Planctomycetes_41_19_curated
S34_3B_scaffold_40424_22
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

Not on your lists

25932..26525
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IHR9_9PLAN
Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
S34_3B_scaffold_40424_23
unknown

Not on your lists

comp(26445..26675)
DNA (231bp) protein (77aa)

This feature has no annotations

S34_3B_scaffold_40424_24
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

comp(26960..27169)
DNA (210bp) protein (70aa)
Putative uncharacterized protein id=3929969 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=CG_Nitrosp_02
S34_3B_scaffold_40424_25
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(27169..27450)
DNA (282bp) protein (94aa)
seg 62..77 id=36007 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S34_3B_scaffold_40424_26
GWA2_OD1_47_12, Parcubacteria, Bacteria

Not on your lists

comp(27456..27665)
DNA (210bp) protein (70aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU59043.1}; TaxID=1618841 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_12.;"
hypothetical protein id=24608354 bin=RAAC11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RAAC11 organism_group=Unknown_CP
hypothetical protein
S34_3B_scaffold_40424_27
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(27694..28788)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI000367464C
hypothetical protein
Tax=CG_Woesearch_02
S34_3B_scaffold_40424_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(28798..29562)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00035CD0BB
Tax=CG_Woesearch_02
S34_3B_scaffold_40424_29
unknown

Not on your lists

comp(29566..30291)
DNA (726bp) protein (242aa)

This feature has no annotations

S34_3B_scaffold_40424_30
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(30296..31963)
DNA (1668bp) protein (556aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI0003783B24
hypothetical protein
Tax=CG_Woesearch_02
Displaying items 1-30 of 173 in total

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