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S34_3B_scaffold_240124

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S34_3B_scaffold_240124_1
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

292..2289
DNA (1998bp) protein (666aa)
Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
S34_3B_scaffold_240124_2

Not on your lists

2331..3632
DNA (1302bp) protein (434aa)
eno; enolase (EC:4.2.1.11)
Enolase {ECO:0000313|EMBL:KKP31513.1}; TaxID=1618918 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_32_10.;"
Enolase id=2583031 bin=GWF2_CPR3_35_18 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF2_CPR3_35_18 organism_group=CPR3
S34_3B_scaffold_240124_3
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3703..4260)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S761_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJG06349.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
hypothetical protein
S34_3B_scaffold_240124_4
Bacillus methanolicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4263..4595)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Bacillus methanolicus PB1 RepID=I3DY56_BACMT
Uncharacterized protein {ECO:0000313|EMBL:EIJ79177.1}; TaxID=997296 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus methanolicus PB1.;"
Hypothetical protein
S34_3B_scaffold_240124_5
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

4738..5013
DNA (276bp) protein (92aa)
hypothetical protein
id=5103836 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Pacearch_02
S34_3B_scaffold_240124_6
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5019..6269)
DNA (1251bp) protein (417aa)
hypothetical ATPase; K07133 id=5041846 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative ATPase
Tax=AR4
S34_3B_scaffold_240124_7
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

6463..7986
DNA (1524bp) protein (508aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] id=5095060 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
phosphoglyceromutase (EC:5.4.2.1)
Tax=RBG_13_Bathyarchaeota_52_12_curated
S34_3B_scaffold_240124_8
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

8036..9271
DNA (1236bp) protein (412aa)
Putative protease id=4328455 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
protease
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S34_3B_scaffold_240124_9
Methanobrevibacter sp. AbM4, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(9320..10117)
DNA (798bp) protein (266aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131};; TaxID=224719 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter sp. AbM4.;"
Tryptophan synthase alpha chain n=1 Tax=Methanobrevibacter sp. AbM4 RepID=R9SNT3_9EURY
trpA; tryptophan synthase alpha subunit TrpA
S34_3B_scaffold_240124_10
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10104..11297)
DNA (1194bp) protein (398aa)
tryptophan synthase beta chain (EC:4.2.1.20)
tryptophan synthase, beta subunit; K01696 tryptophan synthase beta chain [EC:4.2.1.20] id=5240922 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tryptophan synthase beta chain {ECO:0000313|EMBL:KKR78908.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
S34_3B_scaffold_240124_11
GWA2_Melainabacteria_34_9_curated, Melainabacteria, Bacteria

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comp(11294..11932)
DNA (639bp) protein (213aa)
N-(5'-phosphoribosyl)anthranilate isomerase n=3 Tax=Anaerostipes RepID=B0M9H8_9FIRM
trpF; putative phosphoribosylanthranilate isomerase
Tax=GWA2_Melainabacteria_34_9_curated
S34_3B_scaffold_240124_12
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11943..12743)
DNA (801bp) protein (267aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
Indole-3-glycerol phosphate synthase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K552_HALHC
Indole-3-glycerol phosphate synthase
S34_3B_scaffold_240124_13
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(12746..13756)
DNA (1011bp) protein (337aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211};; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BD09_METIK
anthranilate phosphoribosyltransferase
S34_3B_scaffold_240124_14

Not on your lists

comp(13758..14369)
DNA (612bp) protein (204aa)
Anthranilate synthase component II {ECO:0000313|EMBL:KHO55794.1}; EC=4.1.3.27 {ECO:0000313|EMBL:KHO55794.1};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
anthranilate synthase / indole-3-glycerol phosphate synthase (EC:4.1.3.27)
Anthranilate synthase component II id=4951777 bin=GWC2_Planctomycetes_45_44 species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
S34_3B_scaffold_240124_15

Not on your lists

comp(14366..15943)
DNA (1578bp) protein (526aa)
anthranilate synthase component I (EC:4.1.3.27)
anthranilate synthase component I; K01657 anthranilate synthase component I [EC:4.1.3.27] id=5240918 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Anthranilate synthase component I {ECO:0000313|EMBL:AJF59909.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AJF59909.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
S34_3B_scaffold_240124_16
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(15952..16956)
DNA (1005bp) protein (335aa)
3-deoxy-7-phosphoheptulonate synthase id=1769134 bin=GWD2_Nitrospirae-related_57_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
3-deoxy-7-phosphoheptulonate synthase
Tax=GWC2_Nitrospirae_57_13_curated
S34_3B_scaffold_240124_17

Not on your lists

17161..17802
DNA (642bp) protein (214aa)
amino acid-binding ACT domain-containing protein id=5041677 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Amino acid-binding ACT protein {ECO:0000313|EMBL:KHO47929.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
S34_3B_scaffold_240124_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(17872..18228)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
Translation initiation factor 1A
Tax=RBG_13_Woesearchaeota_36_6_curated
S34_3B_scaffold_240124_19
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(18271..19311)
DNA (1041bp) protein (347aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003804E87
MscS Mechanosensitive ion channel
Tax=CG_Pacearch_03
S34_3B_scaffold_240124_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19391..19609)
DNA (219bp) protein (73aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
histone HMtA2
Tax=CG_Woesearch_02
S34_3B_scaffold_240124_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19696..20361)
DNA (666bp) protein (222aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E871_METMS
Tax=CG_Woesearch_02
S34_3B_scaffold_240124_22

Not on your lists

20436..20981
DNA (546bp) protein (182aa)
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
XRE family transcriptional regulator {ECO:0000313|EMBL:KHO46373.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
putative transcription regulator, containing CBS protein
S34_3B_scaffold_240124_23
unknown

Not on your lists

comp(21005..21160)
DNA (156bp) protein (52aa)

This feature has no annotations

S34_3B_scaffold_240124_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(21181..23643)
DNA (2463bp) protein (821aa)
DNA polymerase n=3 Tax=Pyrococcus RepID=DPOL_PYRFU id=5103201 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase
Tax=CG_Woesearch_02
S34_3B_scaffold_240124_25

Not on your lists

23762..25174
DNA (1413bp) protein (471aa)
fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] id=5045869 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Adenylosuccinate lyase {ECO:0000313|EMBL:KHO46482.1}; EC=4.3.2.2 {ECO:0000313|EMBL:KHO46482.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
adenylosuccinate lyase
S34_3B_scaffold_240124_trna_1
unknown

Not on your lists

25201..25291
DNA (91bp)
transferRNA Asn
S34_3B_scaffold_240124_26

Not on your lists

comp(25302..25634)
DNA (333bp) protein (111aa)
id=5048677 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45340.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S34_3B_scaffold_240124_27
unknown

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comp(26063..26206)
DNA (144bp) protein (48aa)

This feature has no annotations

S34_3B_scaffold_240124_28
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

26373..27014
DNA (642bp) protein (214aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WK93_METH6
Multiple antibiotic resistance (MarC)-related protein {ECO:0000313|EMBL:KKQ84168.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
Multiple antibiotic resistance (MarC)-related protein
S34_3B_scaffold_240124_29

Not on your lists

comp(27044..30307)
DNA (3264bp) protein (1088aa)
carB; Carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=5046262 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:KHO46063.1}; EC=6.3.5.5 {ECO:0000313|EMBL:KHO46063.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
Displaying items 1-30 of 90 in total

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