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S34_3B_scaffold_372715

Search features with annotation key words

Displaying items 1-30 of 164 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S34_3B_scaffold_372715_1
unknown

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comp(1..165)
DNA (165bp) protein (55aa)

This feature has no annotations

S34_3B_scaffold_372715_2
unknown

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comp(353..1081)
DNA (729bp) protein (243aa)

This feature has no annotations

S34_3B_scaffold_372715_3

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1197..1778
DNA (582bp) protein (194aa)
hypothetical protein
id=5103861 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF63139.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S34_3B_scaffold_372715_4

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2003..2887
DNA (885bp) protein (295aa)
mechanosensitive ion channel MscS id=5044652 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:KHO46177.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
mechanosensitive ion channel MscS
S34_3B_scaffold_372715_5
AR4, Woesearchaeaota, DPANN, Archaea

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2884..3825
DNA (942bp) protein (314aa)
magnesium and cobalt transporter CorA; K03284 magnesium transporter id=5044651 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
magnesium and cobalt transport protein CorA
Tax=AR4
S34_3B_scaffold_372715_6

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comp(3841..4209)
DNA (369bp) protein (123aa)
Marine sediment metagenome DNA, contig: S01H1_L00446 {ECO:0000313|EMBL:GAF83590.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Uncharacterized protein id=1837089 bin=GWE2_Bacteroidetes_40_15 species=Methanobacterium sp. Maddingley MBC34 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
S34_3B_scaffold_372715_7
RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated, Uhrbacteria, Parcubacteria, Bacteria

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4378..6903
DNA (2526bp) protein (842aa)
phosphoenolpyruvate synthase (EC:2.7.9.2)
Pyruvate, water dikinase (Fragment) n=1 Tax=uncultured bacterium RepID=K2AKW7_9BACT
Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_41_18_curated
S34_3B_scaffold_372715_8
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

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6900..8357
DNA (1458bp) protein (486aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QD50_9EURY
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:EGQ40198.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
phosphoenolpyruvate synthase
S34_3B_scaffold_372715_9
unknown

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8347..8820
DNA (474bp) protein (158aa)
Adenine specific DNA methyltransferase id=3930545 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
S34_3B_scaffold_372715_10
unknown

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8911..9189
DNA (279bp) protein (93aa)
Adenine specific DNA methyltransferase id=3930545 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
S34_3B_scaffold_372715_11
CG_Beckwith_02, Beckwithbacteria, Microgenomates, Bacteria

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comp(9237..10034)
DNA (798bp) protein (266aa)
ATPase BadF/BadG/BcrA/BcrD type n=1 Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L7B5_KORCO
pantothenate kinase
Tax=CG_Beckwith_02
S34_3B_scaffold_372715_12
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10018..11790)
DNA (1773bp) protein (591aa)
Oligopeptide transporter, OPT superfamily n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JT47_9THEM
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
S34_3B_scaffold_372715_13
unknown

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11935..12555
DNA (621bp) protein (207aa)

This feature has no annotations

S34_3B_scaffold_372715_14
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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12569..13675
DNA (1107bp) protein (369aa)
Putative Glycosyl transferase, group 1 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLK2_9BACT
Glycosyl transferase, group 1
Putative Glycosyl transferase, group 1 {ECO:0000313|EMBL:CBE67868.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
S34_3B_scaffold_372715_15
CG_Woesearch_02, Woesearchaeota, Archaea

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13739..14347
DNA (609bp) protein (203aa)
hypothetical protein id=5047371 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=CG_Woesearch_02
S34_3B_scaffold_372715_16

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14352..15341
DNA (990bp) protein (330aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01081}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Probable tRNA pseudouridine synthase B id=5799607 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative tRNA pseudouridine synthase B
S34_3B_scaffold_372715_17
unknown

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comp(15375..15983)
DNA (609bp) protein (203aa)

This feature has no annotations

S34_3B_scaffold_372715_18
AR11, Woesearchaeaota, DPANN, Archaea

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16129..18666
DNA (2538bp) protein (846aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5048640 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Tax=AR11
S34_3B_scaffold_372715_19
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

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18668..19573
DNA (906bp) protein (302aa)
est-1; carboxylesterase (est-1) id=14149 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
est-1; carboxylesterase
Tax=CG_Magasa_01
S34_3B_scaffold_372715_20

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19685..20143
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0A9E6_9EURY id=5103035 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62316.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S34_3B_scaffold_372715_21

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20208..20789
DNA (582bp) protein (194aa)
Zinc finger protein {ECO:0000313|EMBL:KHO51406.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ZPR1-like protein zinc finger protein
S34_3B_scaffold_372715_22
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

20844..21341
DNA (498bp) protein (166aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.26)
Sugar-phosphate isomerase RpiB/LacA/LacB family n=1 Tax=Clostridium sp. CAG:306 RepID=R6PLD4_9CLOT
Tax=CG_Omnitr_02
S34_3B_scaffold_372715_23
R_OD1_Azambacteria_40_24, Azambacteria, Parcubacteria, Bacteria

Not on your lists

21384..22979
DNA (1596bp) protein (532aa)
Phosphoesterase RecJ domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYN0_METFV
phosphoesterase recj domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Azambacteria_40_24_curated
S34_3B_scaffold_372715_24
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

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comp(23049..23996)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M8I9_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ELS05563.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
S34_3B_scaffold_372715_25
Xenococcus sp. PCC 7305, Xenococcus, Pleurocapsales, Cyanobacteria, Bacteria

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comp(23986..25641)
DNA (1656bp) protein (552aa)
Putative carbamoyl transferase, NodU family n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M081_9CYAN
Putative carbamoyl transferase, NodU family {ECO:0000313|EMBL:ELS02563.1}; TaxID=102125 species="Bacteria; Cyanobacteria; Pleurocapsales; Xenococcus.;" source="Xenococcus sp. PCC 7305.;"
putative carbamoyl transferase
S34_3B_scaffold_372715_26
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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25820..26539
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D6B10
transcriptional regulator TrmB
Tax=RBG_13_Pacearchaeota_36_9_curated
S34_3B_scaffold_372715_27
AR18, Woesearchaeaota, DPANN, Archaea

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26676..27284
DNA (609bp) protein (203aa)
Nucleotidyltransferase family protein id=5049559 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Nucleotidyltransferase family protein
Tax=AR18
S34_3B_scaffold_372715_28
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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comp(27355..28350)
DNA (996bp) protein (332aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQ73_9BACT
Tax=RBG_16_Zixibacteria_53_22_curated
S34_3B_scaffold_372715_29
unknown

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comp(28469..29671)
DNA (1203bp) protein (401aa)

This feature has no annotations

S34_3B_scaffold_372715_trna_1
unknown

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comp(29744..29818)
DNA (75bp)
transferRNA Met
Displaying items 1-30 of 164 in total

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