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S34_3B_scaffold_821266

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S34_3B_scaffold_821266_1

Not on your lists

comp(196..1254)
DNA (1059bp) protein (353aa)
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61714.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
RNA methylase
S34_3B_scaffold_821266_2
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1285..2082)
DNA (798bp) protein (266aa)
RNA methyltransferase, TrmH family, group 1 id=5800379 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_01
S34_3B_scaffold_821266_3
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

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comp(2054..2800)
DNA (747bp) protein (249aa)
Transcriptional regulator, TrmB n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EFH2_PYRF1
transcriptional regulator TrmB
Tax=RBG_16_Micrarchaeota_49_10_curated
S34_3B_scaffold_821266_4
GWC2_OP11_41_21, Curtissbacteria, Microgenomates, Bacteria

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2877..4277
DNA (1401bp) protein (467aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=136458 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase {ECO:0000313|EMBL:KKS01799.1}; TaxID=1618415 species="Bacteria; Microgenomates.;" source="Microgenomates (Curtissbacteria) bacterium GW2011_GWC2_41_21.;"
S34_3B_scaffold_821266_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4279..4527)
DNA (249bp) protein (83aa)
Tax=CG_Woesearch_02
S34_3B_scaffold_821266_6
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(4530..6284)
DNA (1755bp) protein (585aa)
sodium/hydrogen exchanger id=5043948 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transporter, CPA2 family
Tax=CG_Woesearch_02
S34_3B_scaffold_821266_7

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comp(6308..7255)
DNA (948bp) protein (316aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
carbohydrate kinase
carbohydrate kinase id=5240577 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
S34_3B_scaffold_821266_8
unknown

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comp(7315..7743)
DNA (429bp) protein (143aa)

This feature has no annotations

S34_3B_scaffold_821266_9
unknown

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comp(7878..8507)
DNA (630bp) protein (210aa)
id=5800448 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S34_3B_scaffold_821266_10
unknown

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comp(8575..9213)
DNA (639bp) protein (213aa)

This feature has no annotations

S34_3B_scaffold_821266_11
unknown

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comp(9405..9956)
DNA (552bp) protein (184aa)

This feature has no annotations

S34_3B_scaffold_821266_12

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comp(10010..10663)
DNA (654bp) protein (218aa)
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46975.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
nitrogen assimilation regulatory protein ntrX
S34_3B_scaffold_821266_13
AR11, Woesearchaeaota, DPANN, Archaea

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10822..11937
DNA (1116bp) protein (372aa)
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Photobacterium sp. AK15 RepID=L8JF69_9GAMM
Tax=AR11
S34_3B_scaffold_821266_14
unknown

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12249..12581
DNA (333bp) protein (111aa)

This feature has no annotations

S34_3B_scaffold_821266_15
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(12669..14486)
DNA (1818bp) protein (606aa)
Probable translation initiation factor IF-2 id=5800003 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
InfB_2; translation initiation factor IF-2
Tax=CG_Woesearch_02
S34_3B_scaffold_821266_16
Peregrinibacteria bacterium GW2011_GWC2_33_13, Peregrinibacteria, Bacteria

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14534..15079
DNA (546bp) protein (182aa)
YdeN-like protein; K07002 id=5090802 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
YdeN-like protein {ECO:0000313|EMBL:KKP40859.1}; TaxID=1619061 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_33_13.;"
ydeN; putative sulfatase
S34_3B_scaffold_821266_17

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15376..16440
DNA (1065bp) protein (355aa)
tRNA (Guanine26-N2/guanine27-N2)-dimethyltransferase {ECO:0000313|EMBL:KHO51018.1}; EC=2.1.1.215 {ECO:0000313|EMBL:KHO51018.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase id=5800001 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA N2,N2-dimethyl(Guanine26-N2)-methyltransferase
S34_3B_scaffold_821266_18

Not on your lists

comp(16453..16731)
DNA (279bp) protein (93aa)
Elongation factor 1-beta
Elongation factor 1-beta id=5799999 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S34_3B_scaffold_821266_19
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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17081..18235
DNA (1155bp) protein (385aa)
Viral A-type inclusion protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2DGN0_TRIVA
Viral A-type inclusion protein, putative {ECO:0000313|EMBL:EAY20417.1}; TaxID=5722 species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
hypothetical protein
S34_3B_scaffold_821266_20
unknown

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18275..18466
DNA (192bp) protein (64aa)

This feature has no annotations

S34_3B_scaffold_821266_21
AR15, Woesearchaeaota, DPANN, Archaea

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comp(18458..19588)
DNA (1131bp) protein (377aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S34_3B_scaffold_821266_22
unknown

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comp(19670..19993)
DNA (324bp) protein (108aa)

This feature has no annotations

S34_3B_scaffold_821266_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(20184..21455)
DNA (1272bp) protein (424aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S34_3B_scaffold_821266_24
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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21728..22579
DNA (852bp) protein (284aa)
Uncharacterized membrane-associated protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KGK97900.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
putative membrane-associated protein/domain protein
S34_3B_scaffold_821266_25
AR4, Woesearchaeaota, DPANN, Archaea

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22593..23789
DNA (1197bp) protein (399aa)
hypothetical protein; K09150 hypothetical protein id=5043729 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S34_3B_scaffold_821266_26
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(23912..25150)
DNA (1239bp) protein (413aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ05_ARCVS
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEA47608.1}; Flags: Precursor;; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strain DSM 11195 / SNP6).;"
S34_3B_scaffold_821266_27
unknown

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comp(25848..26852)
DNA (1005bp) protein (335aa)

This feature has no annotations

S34_3B_scaffold_821266_28
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

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26949..27713
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKT92456.1}; TaxID=1618662 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
hypothetical protein
S34_3B_scaffold_821266_16S_1
unknown

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27974..29443
DNA (1470bp)
16S ribosomal RNA (16S rRNA)
S34_3B_scaffold_821266_29
Pyrococcus horikoshii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(28087..28467)
DNA (381bp) protein (127aa)
Putative uncharacterized protein PH0217 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O57956_PYRHO
Putative uncharacterized protein PH0217 {ECO:0000313|EMBL:BAA29286.1}; TaxID=70601 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /; NBRC 100139 / OT-3).;"
Displaying items 1-30 of 87 in total

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