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S35_SO-1_scaffold_95850

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_95850_1
R_SM2F11_46_11, SM2F11, Bacteria

Not on your lists

comp(137..790)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ATN1_9BACT
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
S35_SO-1_scaffold_95850_2

Not on your lists

comp(831..1217)
DNA (387bp) protein (129aa)
30S ribosomal protein S8e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXJ1_METFV
Marine sediment metagenome DNA, contig: S06H3_C02543 {ECO:0000313|EMBL:GAH93280.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
30S ribosomal protein S8e
S35_SO-1_scaffold_95850_3
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

1352..1570
DNA (219bp) protein (73aa)
Small nuclear ribonucleoprotein, LSM family; K04796 small nuclear ribonucleoprotein id=18248263 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
small nuclear ribonucleoprotein
Tax=CG_Aenigma_01
S35_SO-1_scaffold_95850_4

Not on your lists

1678..2010
DNA (333bp) protein (111aa)
hypothetical protein; K09152 hypothetical protein id=18248456 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Uncharacterized protein {ECO:0000313|EMBL:KHO48459.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
S35_SO-1_scaffold_95850_5
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(2119..3222)
DNA (1104bp) protein (368aa)
hypothetical protein
NurA domain id=5241666 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Aenigma_01
S35_SO-1_scaffold_95850_6
unknown

Not on your lists

comp(3248..3622)
DNA (375bp) protein (125aa)

This feature has no annotations

S35_SO-1_scaffold_95850_7
unknown

Not on your lists

comp(3663..4316)
DNA (654bp) protein (218aa)

This feature has no annotations

S35_SO-1_scaffold_95850_8
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

4445..5557
DNA (1113bp) protein (371aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000366C3E3
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
S35_SO-1_scaffold_95850_9
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5576..7018
DNA (1443bp) protein (481aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius (strain Tc-4-1) (Bacillus; acidocaldarius).;"
Adenylosuccinate lyase id=4918883 bin=PER_GWC2_41_7 species=Candidatus Arthromitus sp. SFB-3 genus=Candidatus Arthromitus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
adenylosuccinate lyase
S35_SO-1_scaffold_95850_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7007..8062)
DNA (1056bp) protein (352aa)
Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WKZ5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETX06171.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
S35_SO-1_scaffold_95850_11
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(8059..8565)
DNA (507bp) protein (169aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310 / DSM 6724).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8DYW9_DICTD
S35_SO-1_scaffold_95850_12
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Berkelbacteria, Bacteria

Not on your lists

8646..9269
DNA (624bp) protein (208aa)
beta-phosphoglucomutase n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B5C2EA
pyrophosphatase
Tax=RIFCSPLOWO2_01_FULL_Berkelbacteria_50_28_curated
S35_SO-1_scaffold_95850_13
RBG_16_Bathyarchaeota_57_9_curated, Bathyarchaeota, Archaea

Not on your lists

9271..10482
DNA (1212bp) protein (404aa)
Putative phosphoribosylformylglycinamidine cyclo-ligase id=4241517 bin=GWF2_Bacteroidetes_33_38 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
phosphoribosylformylglycinamidine cyclo-ligase
Tax=RBG_16_Bathyarchaeota_57_9_curated
S35_SO-1_scaffold_95850_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

10569..11354
DNA (786bp) protein (262aa)
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] id=14425693 bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
S35_SO-1_scaffold_95850_15
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

11356..12684
DNA (1329bp) protein (443aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B4E8EE
Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
S35_SO-1_scaffold_95850_16
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists


12736..14223
DNA (1488bp) protein (496aa)
ttr:Tter_0176 methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=87094 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
methionyl-tRNA synthetase
Tax=CG_Aenigma_01
S35_SO-1_scaffold_95850_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(14225..15295)
DNA (1071bp) protein (357aa)
DNA polymerase IV n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MNG6_9EURY
DNA-directed DNA polymerase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
S35_SO-1_scaffold_95850_18
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists


15348..15674
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A9C8_9BACT
Methionyl-tRNA synthetase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
S35_SO-1_scaffold_95850_19
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

15712..16182
DNA (471bp) protein (157aa)
Putative signal transduction protein with CBS domains id=4922291 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:AEF96984.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
S35_SO-1_scaffold_95850_20
R_WOR_2_48_11, WOR-2, Bacteria

Not on your lists

comp(16163..17098)
DNA (936bp) protein (312aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI00035D3786
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
S35_SO-1_scaffold_95850_trna_1
unknown

Not on your lists

comp(17134..17232)
DNA (99bp)
transferRNA Arg
S35_SO-1_scaffold_95850_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

17268..17669
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T954_9EURY
hypothetical protein
Tax=RBG_16_Micrarchaeota_49_10_curated
S35_SO-1_scaffold_95850_22
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

17717..18046
DNA (330bp) protein (110aa)
hypothetical protein
id=5240537 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
S35_SO-1_scaffold_95850_23

Not on your lists

18043..18378
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1CJD6_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD66904.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
S35_SO-1_scaffold_95850_24
unknown

Not on your lists

comp(18452..19192)
DNA (741bp) protein (247aa)

This feature has no annotations

S35_SO-1_scaffold_95850_25

Not on your lists

19280..19432
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:AIE90179.1}; TaxID=1455878 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote AD1000_01_A07.;"
Fused DNA topoisomerase I/SWI domain-containing protein id=4845812 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
fused DNA topoisomerase I/SWI domain-containing protein
S35_SO-1_scaffold_95850_26

Not on your lists

19503..20573
DNA (1071bp) protein (357aa)
Marine sediment metagenome DNA, contig: S01H1_L05969 {ECO:0000313|EMBL:GAF69391.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MscS Mechanosensitive ion channel id=5093976 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
MscS mechanosensitive ion channel family protein
S35_SO-1_scaffold_95850_27
R_OP11_Woesebacteria_39_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

20620..21465
DNA (846bp) protein (282aa)
bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase (EC:3.1.3.11); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] id=35513 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_10_curated
S35_SO-1_scaffold_95850_28
R_OD1_Wolfebacteria_42_16, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

21495..22400
DNA (906bp) protein (302aa)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Wolfebacteria_42_16_curated
S35_SO-1_scaffold_95850_29
unknown

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comp(22397..23050)
DNA (654bp) protein (218aa)

This feature has no annotations

Displaying items 1-30 of 86 in total

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