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S35_SO-1_scaffold_22209

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_22209_1
unknown

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comp(117..278)
DNA (162bp) protein (54aa)

This feature has no annotations

S35_SO-1_scaffold_22209_2
unknown

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comp(541..921)
DNA (381bp) protein (127aa)

This feature has no annotations

S35_SO-1_scaffold_22209_3
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

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1209..2414
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B1CCA
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
S35_SO-1_scaffold_22209_4
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(2609..3601)
DNA (993bp) protein (331aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5241813 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=CG_Woesearch_03
S35_SO-1_scaffold_22209_5
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

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3699..5018
DNA (1320bp) protein (440aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
S35_SO-1_scaffold_22209_6
R_OP11_Levybacteria_37_33, Levybacteria, Microgenomates, Bacteria

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comp(5324..5884)
DNA (561bp) protein (187aa)
Putative uncharacterized protein id=4201023 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
ydeN; putative sulfatase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_37_33_curated
S35_SO-1_scaffold_22209_7

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comp(5953..7491)
DNA (1539bp) protein (513aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ski2-like helicase
S35_SO-1_scaffold_22209_8
Oceanimonas sp. GK1, Oceanimonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7682..8269
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI00037EBF9B
peptidase M23
Peptidase M23 {ECO:0000313|EMBL:AEY00748.1}; TaxID=511062 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Oceanimonas.;" source="Oceanimonas sp. (strain GK1).;"
S35_SO-1_scaffold_22209_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8346..9074)
DNA (729bp) protein (243aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
S35_SO-1_scaffold_22209_10
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9159..11483)
DNA (2325bp) protein (775aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
Putative Ig domain-containing protein {ECO:0000313|EMBL:ETA68609.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
outer membrane protein
S35_SO-1_scaffold_22209_11
Parcubacteria bacterium GW2011_GWA2_46_7, Parcubacteria, Bacteria

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comp(11535..12680)
DNA (1146bp) protein (382aa)
Ig family protein {ECO:0000313|EMBL:KKU43483.1}; TaxID=1618837 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_7.;"
Pyrrolo-quinoline quinone id=5800544 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S35_SO-1_scaffold_22209_12

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comp(12860..13279)
DNA (420bp) protein (140aa)
glyoxalase n=1 Tax=Pseudomonas veronii RepID=UPI000347CD55
Uncharacterized protein {ECO:0000313|EMBL:KKQ55433.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
glyoxalase/bleomycin resistance protein/dioxygenase
S35_SO-1_scaffold_22209_13
unknown

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comp(13316..13414)
DNA (99bp) protein (33aa)

This feature has no annotations

S35_SO-1_scaffold_22209_14
unknown

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13965..14327
DNA (363bp) protein (121aa)

This feature has no annotations

S35_SO-1_scaffold_22209_15

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14787..16244
DNA (1458bp) protein (486aa)
Oxidative cyclase id=5800341 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Oxidative cyclase {ECO:0000313|EMBL:AJF61672.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
oxidative cyclase
S35_SO-1_scaffold_22209_16

Not on your lists

16384..17361
DNA (978bp) protein (326aa)
metal dependent phosphohydrolase; K06885 id=5045994 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45804.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
ydhJ; metal-dependent phosphohydrolase; oxetanocin A resistance protein
S35_SO-1_scaffold_22209_17
unknown

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comp(17364..17720)
DNA (357bp) protein (119aa)

This feature has no annotations

S35_SO-1_scaffold_22209_18
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(17704..18951)
DNA (1248bp) protein (416aa)
Sodium/hydrogen antiporter n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VD7_METBU
Transcriptional regulator {ECO:0000313|EMBL:KKG15742.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.T.1A.15.;"
Na+/H+ antiporter
S35_SO-1_scaffold_22209_19
Chamaesiphon minutus, Chamaesiphon, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18953..19390)
DNA (438bp) protein (146aa)
Putative transcriptional regulator, contains C-terminal CBS domains n=1 Tax=Chamaesiphon minutus PCC 6605 RepID=K9U9M3_9CHRO
putative transcriptional regulator, contains C-terminal CBS domains
Putative transcriptional regulator, contains C-terminal CBS domains {ECO:0000313|EMBL:AFY91535.1}; TaxID=1173020 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Chamaesiphon.;" source="Chamaesiphon minutus PCC 6605.;"
S35_SO-1_scaffold_22209_20
unknown

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comp(19455..19574)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 20 items

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