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S35_SO-1_scaffold_126793

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_126793_1
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)
IS200-type transposase; K07491 putative transposase id=5047348 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S35_SO-1_scaffold_126793_2
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(352..795)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ64453.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
IS200-type transposase; K07491 putative transposase id=5047348 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
S35_SO-1_scaffold_126793_3
unknown

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comp(1038..1850)
DNA (813bp) protein (271aa)

This feature has no annotations

S35_SO-1_scaffold_126793_4
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1852..2370)
DNA (519bp) protein (173aa)
ZPR1-like zinc finger protein; K06874 zinc finger protein id=5049199 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ZPR1-like protein zinc finger protein
Tax=AR9
S35_SO-1_scaffold_126793_5
unknown

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comp(2737..2910)
DNA (174bp) protein (58aa)

This feature has no annotations

S35_SO-1_scaffold_126793_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

2998..3834
DNA (837bp) protein (279aa)
Tax=AR9
S35_SO-1_scaffold_126793_7

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3983..7474
DNA (3492bp) protein (1164aa)
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation ATPase
S35_SO-1_scaffold_126793_8
unknown

Not on your lists

7533..7856
DNA (324bp) protein (108aa)

This feature has no annotations

S35_SO-1_scaffold_126793_9
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(7923..8159)
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=2785367 bin=GWF2_OP3_38_59 species=uncultured microorganism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S35_SO-1_scaffold_126793_10
DS1215_Thermoanaerobacter_34_5835, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8425..10350)
DNA (1926bp) protein (642aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=3 Tax=Thermoanaerobacter RepID=B0KAG9_THEP3
Tax=DS1215_Thermoanaerobacter_34_5835
S35_SO-1_scaffold_126793_11

Not on your lists

comp(10529..13063)
DNA (2535bp) protein (845aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B9784
Marine sediment metagenome DNA, contig: S01H1_S33701 {ECO:0000313|EMBL:GAG36895.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S35_SO-1_scaffold_126793_12
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(13128..14078)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003824DB2
putative bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
S35_SO-1_scaffold_126793_13
unknown

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14171..15193
DNA (1023bp) protein (341aa)

This feature has no annotations

S35_SO-1_scaffold_126793_14

Not on your lists

15230..16150
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A5K9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHO50693.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
Multimeric flavodoxin WrbA
S35_SO-1_scaffold_126793_15
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

16220..16360
DNA (141bp) protein (47aa)
hypothetical protein id=8265582 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=Methanomicrobia phylum=Euryarchaeota tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
S35_SO-1_scaffold_126793_16

Not on your lists


comp(16538..17137)
DNA (600bp) protein (200aa)
Small subunit ribosomal protein S7 {ECO:0000313|EMBL:KHO49278.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
30S ribosomal protein S7 id=5799588 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S7
S35_SO-1_scaffold_126793_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(17134..17553)
DNA (420bp) protein (140aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
Tax=AR9
S35_SO-1_scaffold_126793_18

Not on your lists

comp(17580..17993)
DNA (414bp) protein (138aa)
Putative KH domain protein n=3 Tax=environmental samples RepID=B3T301_9ARCH id=5103769 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
hypothetical protein
S35_SO-1_scaffold_126793_19
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18002..18286)
DNA (285bp) protein (95aa)
NEQ179 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MP1_NANEQ
hypothetical protein
Tax=AR9
S35_SO-1_scaffold_126793_20

Not on your lists

comp(18520..19662)
DNA (1143bp) protein (381aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO49282.1}; EC=2.7.7.6 {ECO:0000313|EMBL:KHO49282.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5043969 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase, subunit B'
S35_SO-1_scaffold_126793_21

Not on your lists

comp(19678..22251)
DNA (2574bp) protein (858aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
S35_SO-1_scaffold_126793_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22262..24067)
DNA (1806bp) protein (602aa)
DNA-directed RNA polymerase id=5800701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
Tax=AR9
S35_SO-1_scaffold_126793_23
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24080..25555)
DNA (1476bp) protein (492aa)
DNA-directed RNA polymerase id=5800700 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
Tax=AR9
S35_SO-1_scaffold_126793_24
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25589..25813)
DNA (225bp) protein (75aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] id=5044124 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase, subunit H
Tax=AR9
S35_SO-1_scaffold_126793_trna_1
unknown

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comp(25867..25957)
DNA (91bp)
transferRNA Lys
S35_SO-1_scaffold_126793_25
unknown

Not on your lists

comp(26869..27003)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 26 items

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