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S35_SO-1_scaffold_87445

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_87445_1
unknown

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1..138
DNA (138bp) protein (46aa)

This feature has no annotations

S35_SO-1_scaffold_87445_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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217..420
DNA (204bp) protein (68aa)
ThiS family, putative id=5800095 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_87445_3
AR20, Woesearchaeaota, DPANN, Archaea

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423..1346
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E7644
hypothetical protein
Tax=AR20
S35_SO-1_scaffold_87445_4
AR15, Woesearchaeaota, DPANN, Archaea

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1343..2059
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379B0D2
UBA/THIF-type NAD/FAD binding protein
Tax=AR15
S35_SO-1_scaffold_87445_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2040..2861)
DNA (822bp) protein (274aa)
thiamine biosynthesis protein ThiI n=1 Tax=Mycoplasma synoviae RepID=UPI0003667C44
thiI; thiamine biosynthesis protein ThiI
Tax=CG_Woesearch_02
S35_SO-1_scaffold_87445_6

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3129..3686
DNA (558bp) protein (186aa)
tbpE; transcription factor; K03120 transcription initiation factor TFIID TATA-box-binding protein id=5046314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
TATA-box-binding protein
S35_SO-1_scaffold_87445_7
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

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3778..5808
DNA (2031bp) protein (677aa)
Putative ATPase involved in replication control, Cdc46/Mcm family id=5800077 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA replication initiator Cdc21/Cdc54
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
S35_SO-1_scaffold_87445_8
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

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5837..6538
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365774B
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
S35_SO-1_scaffold_87445_9
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6711..7565)
DNA (855bp) protein (285aa)
Uncharacterized membrane protein id=5041824 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
S35_SO-1_scaffold_87445_10
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

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8377..9582
DNA (1206bp) protein (402aa)
Cell division control protein 6 homolog id=2334556 bin=GWA2_Bacteroidetes_40_14 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
ORC1-type DNA replication protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
S35_SO-1_scaffold_87445_11
CG_Woesearch_02, Woesearchaeota, Archaea

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9596..11290
DNA (1695bp) protein (565aa)
DNA polymerase II small subunit (EC:2.7.7.7); K02323 DNA polymerase II small subunit [EC:2.7.7.7] id=5046338 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_87445_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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11292..14990
DNA (3699bp) protein (1233aa)
DNA polymerase II large subunit id=5800100 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase II large subunit
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_87445_13

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comp(14992..15285)
DNA (294bp) protein (98aa)
Uncharacterized protein n=2 Tax=Pyrococcus furiosus RepID=I6TXC3_9EURY
Marine sediment metagenome DNA, contig: S12H4_S02448 {ECO:0000313|EMBL:GAI95743.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S35_SO-1_scaffold_87445_14
AR20, Woesearchaeaota, DPANN, Archaea

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comp(15287..15697)
DNA (411bp) protein (137aa)
Translation initiation factor 2 subunit beta n=2 Tax=Methanothermobacter RepID=IF2B_METTH id=5103227 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit beta
Tax=AR20
S35_SO-1_scaffold_87445_15
unknown

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comp(15909..16046)
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 15 items

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