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S35_SO-1_scaffold_240376

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_240376_1
unknown

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comp(2..166)
DNA (165bp) protein (55aa)

This feature has no annotations

S35_SO-1_scaffold_240376_2

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comp(275..1369)
DNA (1095bp) protein (365aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Uncharacterized protein id=5800116 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S35_SO-1_scaffold_240376_3
AR9, Woesearchaeaota, DPANN, Archaea

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1473..2111
DNA (639bp) protein (213aa)
HAD superfamily hydrolase n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WCW2_BACSK
HAD superfamily hydrolase
Tax=AR9
S35_SO-1_scaffold_240376_4

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2108..2998
DNA (891bp) protein (297aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
S35_SO-1_scaffold_240376_5
R_OD1_Nomurabacteria_46_18, Nomurabacteria, Parcubacteria, Bacteria

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3344..3625
DNA (282bp) protein (94aa)
Putative uncharacterized protein id=3688777 bin=PER_GWC2_41_7 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_46_18_curated
S35_SO-1_scaffold_240376_6
CG_Woesearch_01, Woesearchaeota, Archaea

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3774..4211
DNA (438bp) protein (146aa)
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type id=5046341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Resolvase, Holliday junction-type
Tax=CG_Woesearch_01
S35_SO-1_scaffold_240376_7

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4239..4958
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D7941
Transcription factor E {ECO:0000256|SAAS:SAAS00008967}; Flags: Fragment;; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Transcription factor E
S35_SO-1_scaffold_240376_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(5072..5266)
DNA (195bp) protein (65aa)
seg id=5800104 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
Displaying 8 items

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