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S35_SO-1_scaffold_710

Search features with annotation key words

Displaying items 1-30 of 1111 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_710_1
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

2..4987
DNA (4986bp) protein (1662aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2F503_9BACT
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
S35_SO-1_scaffold_710_2
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

5124..7898
DNA (2775bp) protein (925aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY88_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_38_18_curated
S35_SO-1_scaffold_710_3

Not on your lists

7949..8407
DNA (459bp) protein (153aa)
transmembrane_regions 7..25 id=71870 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD64683.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S35_SO-1_scaffold_710_4

Not on your lists

8482..9345
DNA (864bp) protein (288aa)
transmembrane_regions 7..29 id=4340 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Uncharacterized protein {ECO:0000313|EMBL:EKE14352.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S35_SO-1_scaffold_710_5
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(9357..10415)
DNA (1059bp) protein (353aa)
hypothetical protein id=5874 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
lipoprotein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
S35_SO-1_scaffold_710_6
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

10513..10794
DNA (282bp) protein (94aa)
hypothetical protein id=41082 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
S23 ribosomal protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
S35_SO-1_scaffold_710_7
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(10977..13088)
DNA (2112bp) protein (704aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EWJ7_9BACT
Tetratricopeptide TPR_2
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
S35_SO-1_scaffold_710_8
R_OP11_Roizmanbacteria_37_12, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(13317..14402)
DNA (1086bp) protein (362aa)
acp:A2cp1_4094 thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=4973 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
trxB; hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_37_12_curated
S35_SO-1_scaffold_710_9
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(14493..14729)
DNA (237bp) protein (79aa)
DUF156 id=4966 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
transcriptional regulator
Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
S35_SO-1_scaffold_710_10
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(14820..16100)
DNA (1281bp) protein (427aa)
ttr:Tter_1339 transcription termination factor Rho; K03628 transcription termination factor Rho id=4972 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
rho; transcription termination factor Rho
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
S35_SO-1_scaffold_710_11

Not on your lists

16634..16873
DNA (240bp) protein (80aa)
transmembrane_regions 5..22 id=4965 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
Uncharacterized protein {ECO:0000313|EMBL:EKE13882.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S35_SO-1_scaffold_710_12
R_OP11_Roizmanbacteria_39_9, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

16948..17961
DNA (1014bp) protein (338aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=5782 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
methionyl-tRNA formyltransferase
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_39_9_curated
S35_SO-1_scaffold_710_13
unknown

Not on your lists

comp(17950..19227)
DNA (1278bp) protein (426aa)

This feature has no annotations

S35_SO-1_scaffold_710_14
GWB1_OP11_43_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(19281..20033)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FAJ7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKS86481.1}; TaxID=1618446 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWB1_43_11.;"
hypothetical protein
S35_SO-1_scaffold_710_15
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(20104..21222)
DNA (1119bp) protein (373aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase id=3423560 bin=GWA1_ZB2_49_26 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
S35_SO-1_scaffold_710_16
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(21270..21821)
DNA (552bp) protein (184aa)
dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3] id=84490 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
dihydrofolate reductase region
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
S35_SO-1_scaffold_710_17
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

22005..22385
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Bacillus methanolicus PB1 RepID=I3E0A4_BACMT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
S35_SO-1_scaffold_710_18

Not on your lists

comp(22669..23652)
DNA (984bp) protein (328aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
thyA; thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] id=74942 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
S35_SO-1_scaffold_710_19
RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(23748..24290)
DNA (543bp) protein (181aa)
Deoxycytidine deaminase n=1 Tax=uncultured bacterium RepID=K2FT65_9BACT
dcd2; deoxycytidine deaminase
Tax=RIFOXYA1_FULL_OP11_Roizmanbacteria_41_12_curated
S35_SO-1_scaffold_710_20
GWC2_OP11_ACD12_35_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(24287..25075)
DNA (789bp) protein (263aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP65268.1}; TaxID=1618485 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_35_12.;"
S35_SO-1_scaffold_710_21
GWC2_OP11P37_13, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

25090..26238
DNA (1149bp) protein (383aa)
Glycosyltransferase, group 1 n=1 Tax=uncultured bacterium RepID=K2F7N7_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKQ25328.1}; TaxID=1618486 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_37_13.;"
glycosyl transferase
S35_SO-1_scaffold_710_22
GWA2_OD1_47_10, Parcubacteria, Bacteria

Not on your lists

26254..28011
DNA (1758bp) protein (586aa)
Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV5 RepID=H1J0G5_9BACT
Ricin B lectin {ECO:0000313|EMBL:KKU52080.1}; Flags: Fragment;; TaxID=1618839 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10.;"
hypothetical protein
S35_SO-1_scaffold_710_23
R_OP11_Roizmanbacteria_39_12c, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(27958..28812)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CD19_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12c_curated
S35_SO-1_scaffold_710_24
RHI_OP11_Roizmanbacteria_37_23, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(28829..29725)
DNA (897bp) protein (299aa)
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_37_23_curated
S35_SO-1_scaffold_710_25
RHI_OP11_Roizmanbacteria_41_18, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

29873..30310
DNA (438bp) protein (146aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Putative ribose-5-phosphate isomerase B (Phosphoriboisomerase B) n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB8_9BACT id=22877 bin=ACD22 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD22 organism_group=WWE3 organism_desc=WWE3
Tax=RIFCSPHIGHO2_12_OP11_Roizmanbacteria_41_18_curated
S35_SO-1_scaffold_710_26
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(30397..31485)
DNA (1089bp) protein (363aa)
transcriptional regulator, MarR family; K04096 DNA processing protein id=42559 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA protecting protein DprA
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
S35_SO-1_scaffold_710_27
R_OD1_Magasanikbacteria_47_8, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(31516..31890)
DNA (375bp) protein (125aa)
Putative uncharacterized protein id=1858794 bin=GWD2_CPR2_39_7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Magasanikbacteria_47_8_curated
S35_SO-1_scaffold_710_28
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(31988..33352)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6EBT5_9BACI
peptidase M20
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
S35_SO-1_scaffold_710_29
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(33477..34058)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=G9ELE3_9GAMM
conserved protein of unknown function
Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
S35_SO-1_scaffold_710_30
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

34126..34884
DNA (759bp) protein (253aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
Displaying items 1-30 of 1111 in total

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