ggKbase home page

S35_SO-1_scaffold_710_229

Organism: Genasci_Feb2018_S35_SO-1_Roizmanbacteria_35_236

near complete RP 45 / 55 BSCG 44 / 51 ASCG 9 / 38
Location: comp(232530..232997)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 12..34 id=43873 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 116.0
  • Bit_score: 68
  • Evalue 4.50e-09
Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 116.0
  • Bit_score: 68
  • Evalue 6.30e-09

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Curtissbacteria_40_16 → Curtissbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 468
ATGAATTATAAAATTAAAATCATAGTTGTTGTTTTTTTAATCGTGACAATTTTCTTGATAATTGTAACTACTTTACTGCAAAAACAAAATGTTAAAAAATCAAACTCTTATGATAGTAAATCAGTTATACCTACCGATTTTATTCCATCAAAACTATCCCCAACTCCCTTATCTTTTGACGCTCCTTTTGTAAACCAGGATTATAAAAAAAGCGCTCAAGAAATAAACAAAGCTGAGTCTCCAATTGTTGAAAAAGAAGCTGCGGTTGGCCGGTTGCTTAATCTTCTGCCTTACTCAGGAAAAAACTTCAAGATGATTAATGATTACAATAAAGCTCAGTATGTAGTCACTATCCCTAAGTCAAAAGAAAAAGAAGGCAATGAAGAGTTTGACGCTTTTTTGAAAAAAAATGGCATTCAAGACAGATTATGGATAAGAAAAAACTTGCTCGTAATCAACTATGAGTGA
PROTEIN sequence
Length: 156
MNYKIKIIVVVFLIVTIFLIIVTTLLQKQNVKKSNSYDSKSVIPTDFIPSKLSPTPLSFDAPFVNQDYKKSAQEINKAESPIVEKEAAVGRLLNLLPYSGKNFKMINDYNKAQYVVTIPKSKEKEGNEEFDAFLKKNGIQDRLWIRKNLLVINYE*