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S35_SO-1_scaffold_116738

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_116738_1

Not on your lists

comp(1..2175)
DNA (2175bp) protein (725aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362CF74
Type IV secretory pathway VirB4 protein-like protein {ECO:0000313|EMBL:AIF11242.1}; TaxID=1456454 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_51_D01.;"
hypothetical protein
S35_SO-1_scaffold_116738_2
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(2135..2488)
DNA (354bp) protein (118aa)
Tax=CG_Pacearch_02
S35_SO-1_scaffold_116738_3
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(2498..3343)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374AD9A
Tax=CG_Pacearch_02
S35_SO-1_scaffold_116738_4
unknown

Not on your lists

comp(3379..4761)
DNA (1383bp) protein (461aa)

This feature has no annotations

S35_SO-1_scaffold_116738_5
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(4722..4922)
DNA (201bp) protein (67aa)
Tax=CG_Pacearch_03
S35_SO-1_scaffold_116738_6
unknown

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comp(4919..5119)
DNA (201bp) protein (67aa)

This feature has no annotations

S35_SO-1_scaffold_116738_7
Microgenomates bacterium GW2011_GWC1_41_8, Microgenomates, Bacteria

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comp(5127..5291)
DNA (165bp) protein (55aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035FF005
Uncharacterized protein {ECO:0000313|EMBL:KKS24219.1}; TaxID=1618519 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_41_8.;"
S35_SO-1_scaffold_116738_8
unknown

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comp(5478..5975)
DNA (498bp) protein (166aa)

This feature has no annotations

S35_SO-1_scaffold_116738_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5983..6342)
DNA (360bp) protein (120aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71945.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
S35_SO-1_scaffold_116738_10
unknown

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comp(6336..6788)
DNA (453bp) protein (151aa)

This feature has no annotations

S35_SO-1_scaffold_116738_11
Arthrobacter nitrophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6766..7617)
DNA (852bp) protein (284aa)
Probable DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407};; Polydeoxyribonucleotide synthase [ATP] {ECO:0000256|HAMAP-Rule:MF_00407}; TaxID=683150 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter nitrophenolicus.;"
DNA ligase n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037DD6D8
ATP-dependent DNA ligase
S35_SO-1_scaffold_116738_12
unknown

Not on your lists

comp(7622..8107)
DNA (486bp) protein (162aa)

This feature has no annotations

S35_SO-1_scaffold_116738_13
unknown

Not on your lists

comp(8222..9151)
DNA (930bp) protein (310aa)

This feature has no annotations

S35_SO-1_scaffold_116738_14
unknown

Not on your lists

9407..9733
DNA (327bp) protein (109aa)

This feature has no annotations

S35_SO-1_scaffold_116738_15
unknown

Not on your lists

9785..10153
DNA (369bp) protein (123aa)

This feature has no annotations

S35_SO-1_scaffold_116738_16
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10387..11793
DNA (1407bp) protein (469aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:KJB91101.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:KJB91101.1};; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A290_MAHA5
S35_SO-1_scaffold_116738_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11837..12727
DNA (891bp) protein (297aa)
map; methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=5799823 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
S35_SO-1_scaffold_116738_18
unknown

Not on your lists

comp(12717..13304)
DNA (588bp) protein (196aa)

This feature has no annotations

S35_SO-1_scaffold_116738_19

Not on your lists


comp(13336..14616)
DNA (1281bp) protein (427aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] id=5045800 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Histidine-tRNA ligase
S35_SO-1_scaffold_116738_20
unknown

Not on your lists

comp(14658..15386)
DNA (729bp) protein (243aa)
ATP phosphoribosyltransferase id=3327401 bin=GWA1_Kazan_50_15 species=unknown genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
S35_SO-1_scaffold_116738_21
RIFOXYB1_FULL_RIF_OD1_07_40_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(15392..16057)
DNA (666bp) protein (222aa)
Rossmann fold nucleotide-binding protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH06_9EURY id=42940 bin=ACD38 species=Candidatus Micrarchaeum acidiphilum genus=Candidatus Micrarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFOXYB1_FULL_RIF_OD1_07_40_15_curated
S35_SO-1_scaffold_116738_trna_1
unknown

Not on your lists

comp(16100..16170)
DNA (71bp)
transferRNA His
S35_SO-1_scaffold_116738_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16426..17037)
DNA (612bp) protein (204aa)
O-sialoglycoprotein endopeptidase id=5800366 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_116738_23
unknown

Not on your lists

comp(17067..17462)
DNA (396bp) protein (132aa)

This feature has no annotations

S35_SO-1_scaffold_116738_24
unknown

Not on your lists

comp(17637..18365)
DNA (729bp) protein (243aa)
type II/IV secretion system ATPase
S35_SO-1_scaffold_116738_25
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(18611..19225)
DNA (615bp) protein (205aa)
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
Tax=AR11
S35_SO-1_scaffold_116738_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19451..21379)
DNA (1929bp) protein (643aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IA14_METCZ
Tax=AR11
S35_SO-1_scaffold_116738_27
unknown

Not on your lists

comp(21562..21855)
DNA (294bp) protein (98aa)

This feature has no annotations

S35_SO-1_scaffold_116738_28
unknown

Not on your lists

comp(21857..22000)
DNA (144bp) protein (48aa)

This feature has no annotations

S35_SO-1_scaffold_116738_29
unknown

Not on your lists

comp(22002..22148)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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