ggKbase home page

S35_SO-1_scaffold_500290

Search features with annotation key words

Displaying items 1-30 of 278 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_500290_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(2..337)
DNA (336bp) protein (112aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
endA; tRNA intron endonuclease (EC:3.1.27.9)
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_500290_2
unknown

Not on your lists

comp(354..884)
DNA (531bp) protein (177aa)

This feature has no annotations

S35_SO-1_scaffold_500290_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

1435..2325
DNA (891bp) protein (297aa)
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
Tax=AR11
S35_SO-1_scaffold_500290_4
unknown

Not on your lists

2585..3784
DNA (1200bp) protein (400aa)

This feature has no annotations

S35_SO-1_scaffold_500290_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3777..4169
DNA (393bp) protein (131aa)
Predicted archaeal holliday junction resolvase id=5800106 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Holliday junction-type resolvase
Tax=AR11
S35_SO-1_scaffold_500290_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4172..4360)
DNA (189bp) protein (63aa)
seg id=5041816 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S35_SO-1_scaffold_500290_7

Not on your lists

comp(4420..5754)
DNA (1335bp) protein (445aa)
hypothetical protein; K00992 [EC:2.7.7.-] id=5050202 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44983.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S35_SO-1_scaffold_500290_8
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

5791..6183
DNA (393bp) protein (131aa)
TOPRIM domain-containing protein id=5050201 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Toprim protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_500290_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(6169..7068)
DNA (900bp) protein (300aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI000364D8EA
Protease HtpX-like protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_500290_10
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7163..7717)
DNA (555bp) protein (185aa)
LemA family protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D774_METSW id=5103214 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LemA family protein
Tax=AR9
S35_SO-1_scaffold_500290_11
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

7821..8663
DNA (843bp) protein (281aa)
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protease HTPX
Tax=AR15
S35_SO-1_scaffold_500290_12
unknown

Not on your lists

comp(8660..9619)
DNA (960bp) protein (320aa)

This feature has no annotations

S35_SO-1_scaffold_500290_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9688..11901)
DNA (2214bp) protein (738aa)
Hef nuclease; K10896 fanconi anemia group M protein id=5041753 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DEAD/DEAH box helicase
Tax=CG_Woesearch_02
S35_SO-1_scaffold_500290_14
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(11948..12718)
DNA (771bp) protein (257aa)
heme/copper-type cytochrome/quinol oxidases subunit 2 id=18248543 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Tax=AR5
S35_SO-1_scaffold_500290_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12726..13049)
DNA (324bp) protein (108aa)
Tax=AR11
S35_SO-1_scaffold_500290_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13050..13802)
DNA (753bp) protein (251aa)
Peptidase M50 id=5041751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S35_SO-1_scaffold_500290_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13953..14699)
DNA (747bp) protein (249aa)
TraB family protein n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VSP1_METIM id=5103107 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
TraB family protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_500290_18

Not on your lists

14793..15083
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50522.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Putative uncharacterized protein id=5800011 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
S35_SO-1_scaffold_500290_19
unknown

Not on your lists

comp(15080..15379)
DNA (300bp) protein (100aa)

This feature has no annotations

S35_SO-1_scaffold_500290_20
GWA2_OD1_51_10, Parcubacteria, Bacteria

Not on your lists

comp(15380..15661)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW19083.1}; TaxID=1618855 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_51_10.;"
S35_SO-1_scaffold_500290_trna_1
unknown

Not on your lists

15796..15867
DNA (72bp)
transferRNA Gly
S35_SO-1_scaffold_500290_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

15953..16177
DNA (225bp) protein (75aa)
Tax=AR11
S35_SO-1_scaffold_500290_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

16433..17041
DNA (609bp) protein (203aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZW3_METMA
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_500290_23

Not on your lists

comp(17031..17504)
DNA (474bp) protein (158aa)
id=5046299 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46100.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S35_SO-1_scaffold_500290_24
unknown

Not on your lists

comp(17611..17919)
DNA (309bp) protein (103aa)

This feature has no annotations

S35_SO-1_scaffold_500290_25
Parcubacteria bacterium GW2011_GWB1_52_7, Parcubacteria, Bacteria

Not on your lists

comp(17968..18714)
DNA (747bp) protein (249aa)
Polymerase sliding clamp protein {ECO:0000313|EMBL:KKW29271.1}; TaxID=1618885 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_52_7.;"
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen id=5046287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA polymerase sliding clamp
S35_SO-1_scaffold_500290_26
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18767..20095)
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820EA3
RNA-metabolising metallo-beta-lactamase
Tax=AR11
S35_SO-1_scaffold_500290_27
unknown

Not on your lists

20128..20793
DNA (666bp) protein (222aa)

This feature has no annotations

S35_SO-1_scaffold_500290_28
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

comp(20817..22673)
DNA (1857bp) protein (619aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase id=2928872 bin=GWF2_OP3_38_59 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
S35_SO-1_scaffold_500290_29

Not on your lists

comp(23180..23581)
DNA (402bp) protein (134aa)
Marine sediment metagenome DNA, contig: S12H4_S12223 {ECO:0000313|EMBL:GAJ07382.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5046267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying items 1-30 of 278 in total

View Taxonomy