ggKbase home page

S35_SO-1_scaffold_498244

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_498244_1
unknown

Not on your lists

156..683
DNA (528bp) protein (176aa)

This feature has no annotations

S35_SO-1_scaffold_498244_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(686..1513)
DNA (828bp) protein (276aa)
tRNA (Guanine37-N1) -methyltransferase; K15429 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] id=5046348 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_498244_3

Not on your lists

comp(1506..2537)
DNA (1032bp) protein (344aa)
rad2; flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5046346 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
flap endonuclease-1
S35_SO-1_scaffold_498244_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(2542..3414)
DNA (873bp) protein (291aa)
Putative uncharacterized protein id=5800109 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_498244_5

Not on your lists

comp(3665..4246)
DNA (582bp) protein (194aa)
Marine sediment metagenome DNA, contig: S01H1_S24988 {ECO:0000313|EMBL:GAG22655.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein id=5044599 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S35_SO-1_scaffold_498244_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(4670..5200)
DNA (531bp) protein (177aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
Tax=CG_Woesearch_02
S35_SO-1_scaffold_498244_7
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(5602..6672)
DNA (1071bp) protein (357aa)
alcohol dehydrogenase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC6F
alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
S35_SO-1_scaffold_498244_8
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

6942..7838
DNA (897bp) protein (299aa)
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
Tax=CG_Pacearch_04
S35_SO-1_scaffold_498244_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

7931..8320
DNA (390bp) protein (130aa)
Holliday junction-type resolvase; K03552 holliday junction resolvase, archaea type id=5041814 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Resolvase, Holliday junction-type
Tax=CG_Woesearch_01
S35_SO-1_scaffold_498244_10

Not on your lists

comp(8317..8541)
DNA (225bp) protein (75aa)
id=5046340 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46141.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying 10 items

View Taxonomy