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S35_SO-1_scaffold_43257

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_43257_1
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

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1..726
DNA (726bp) protein (242aa)
BNR repeat domain protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09AV4_STIAU id=110246 bin=ACD73 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
S35_SO-1_scaffold_43257_2
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

714..1313
DNA (600bp) protein (200aa)
segregation and condensation protein B; K06024 segregation and condensation protein B id=5044965 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Segregation and condensation protein B
Tax=AR18
S35_SO-1_scaffold_43257_3

Not on your lists

1306..2769
DNA (1464bp) protein (488aa)
hypothetical protein
id=5103316 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62597.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S35_SO-1_scaffold_43257_4
AR20, Woesearchaeaota, DPANN, Archaea

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2798..4138
DNA (1341bp) protein (447aa)
hypothetical protein
id=5103317 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S35_SO-1_scaffold_43257_5
AR18, Woesearchaeaota, DPANN, Archaea

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4135..5388
DNA (1254bp) protein (418aa)
putative bi-functional transferase/deacetylase id=5044969 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glycosyltransferase involved in cell wall biogenesis
Tax=AR18
S35_SO-1_scaffold_43257_6
CG_Woesearch_02, Woesearchaeota, Archaea

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5390..6076
DNA (687bp) protein (229aa)
Thioredoxin-like fold id=5800033 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=CG_Woesearch_02
S35_SO-1_scaffold_43257_7
CG_Woesearch_02, Woesearchaeota, Archaea

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6045..6506
DNA (462bp) protein (154aa)
Transcriptional regulator, XRE family n=1 Tax=nanoarchaeote Nst1 RepID=R1GA40_9ARCH
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_43257_8

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6543..6809
DNA (267bp) protein (89aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
DNA-directed RNA polymerase subunit L n=2 Tax=Methanobacterium RepID=K6SZJ9_9EURY id=5103326 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit L
S35_SO-1_scaffold_43257_9

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6850..7404
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52520.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
S35_SO-1_scaffold_43257_10

Not on your lists

7408..7731
DNA (324bp) protein (108aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Transcription-associated protein TFIIS n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZ68_9EURY id=5103330 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription-associated protein TFIIS
S35_SO-1_scaffold_43257_11
unknown

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7731..8021
DNA (291bp) protein (97aa)

This feature has no annotations

S35_SO-1_scaffold_43257_12
unknown

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8014..8367
DNA (354bp) protein (118aa)

This feature has no annotations

S35_SO-1_scaffold_43257_13
AR20, Woesearchaeaota, DPANN, Archaea

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8418..9164
DNA (747bp) protein (249aa)
DNA polymerase sliding clamp n=1 Tax=Candidatus Nanosalina sp. J07AB43 RepID=G0QGT4_9EURY id=5103332 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA polymerase sliding clamp
Tax=AR20
S35_SO-1_scaffold_43257_14
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

9203..12355
DNA (3153bp) protein (1051aa)
id=5049521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=CG_Pacearch_03
S35_SO-1_scaffold_43257_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

12397..13167
DNA (771bp) protein (257aa)
id=5049520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR17
S35_SO-1_scaffold_43257_16

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13179..17039
DNA (3861bp) protein (1287aa)
id=5049521 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53857.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
S35_SO-1_scaffold_43257_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

17072..17236
DNA (165bp) protein (55aa)
Tax=AR9
S35_SO-1_scaffold_43257_18
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(17305..17490)
DNA (186bp) protein (62aa)
Tax=CG_Pacearch_06
S35_SO-1_scaffold_43257_19
unknown

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17597..18580
DNA (984bp) protein (328aa)

This feature has no annotations

S35_SO-1_scaffold_43257_20

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18564..19091
DNA (528bp) protein (176aa)
id=5049526 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO53862.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
S35_SO-1_scaffold_43257_21
unknown

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19088..19525
DNA (438bp) protein (146aa)

This feature has no annotations

S35_SO-1_scaffold_43257_22
AR17, Woesearchaeaota, DPANN, Archaea

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19750..21993
DNA (2244bp) protein (748aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000375783B
hypothetical protein
Tax=AR17
S35_SO-1_scaffold_43257_23
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

22111..24465
DNA (2355bp) protein (785aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D05C0
hypothetical protein
Tax=AR20
S35_SO-1_scaffold_43257_24
unknown

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24524..24679
DNA (156bp) protein (52aa)

This feature has no annotations

S35_SO-1_scaffold_43257_25
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

24681..26165
DNA (1485bp) protein (495aa)
hypothetical protein
id=5103436 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S35_SO-1_scaffold_43257_26
RHI_RIF_OP11_01_44_25, RIF-OP11-1, Microgenomates, Bacteria

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26158..26880
DNA (723bp) protein (241aa)
Glycosyl transferase family 2 id=4927187 bin=GWA2_Ignavibacteria_55_11 species=Segniliparus rotundus genus=Segniliparus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
family 2 glycosyl transferase
Tax=RIFCSPHIGHO2_12_FULL_RIF_OP11_01_44_25_curated
S35_SO-1_scaffold_43257_27
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

26911..27903
DNA (993bp) protein (331aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase id=2907885 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Tax=RBG_13_Nitrospirae_39_12_curated
S35_SO-1_scaffold_43257_28
GWA1_OP11_36_8, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

27909..28496
DNA (588bp) protein (196aa)
methyltransferase (EC:2.1.1.-)
Methyltransferase type 11 n=1 Tax=uncultured bacterium RepID=K2DA45_9BACT
Methyltransferase type 11 {ECO:0000313|EMBL:KKQ15750.1}; TaxID=1618417 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_36_8.;"
S35_SO-1_scaffold_43257_29
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

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comp(28497..29861)
DNA (1365bp) protein (455aa)
Radical SAM domain protein id=4358005 bin=GWF2_Lentisphaerae_50_93 species=Methanobacterium sp. genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Radical SAM domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
S35_SO-1_scaffold_43257_30

Not on your lists

29949..30956
DNA (1008bp) protein (336aa)
glycosyl transferase family protein; K01001 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15] id=5051062 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase {ECO:0000313|EMBL:KHO53199.1}; EC=2.7.8.15 {ECO:0000313|EMBL:KHO53199.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Glycosyl transferase family 4
Displaying items 1-30 of 35 in total

View Taxonomy