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S35_SO-1_scaffold_195815

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_195815_1
Fulvimarina pelagi, Fulvimarina, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..459
DNA (459bp) protein (153aa)
2'-deoxycytidine 5'-triphosphate deaminase {ECO:0000313|EMBL:EAU41779.1}; EC=3.5.4.13 {ECO:0000313|EMBL:EAU41779.1};; TaxID=314231 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Fulvimarina.;" source="Fulvimarina pelagi HTCC2506.;"
2'-deoxycytidine 5'-triphosphate deaminase n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3Q2_9RHIZ
2'-deoxycytidine 5'-triphosphate deaminase (DCD)
S35_SO-1_scaffold_195815_2

Not on your lists

comp(565..3519)
DNA (2955bp) protein (985aa)
Tetratricopeptide TPR_2 repeat-containing protein n=2 Tax=Myroides RepID=H1Z6I6_MYROD
Uncharacterized protein {ECO:0000313|EMBL:KKN10352.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
AAA ATPase
S35_SO-1_scaffold_195815_3
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(3529..5217)
DNA (1689bp) protein (563aa)
Thymidylate synthase, putative n=1 Tax=Raphidiopsis brookii D9 RepID=D4TUX5_9NOST id=96190 bin=ACD63 species=Raphidiopsis brookii genus=Raphidiopsis taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
thymidylate synthase, methanogen type
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
S35_SO-1_scaffold_195815_4
AR20, Woesearchaeaota, DPANN, Archaea

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5316..5630
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3INE5_9PLAN id=5103885 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S35_SO-1_scaffold_195815_5
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(5705..7480)
DNA (1776bp) protein (592aa)
hypothetical protein
id=5102982 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Woesearch_03
S35_SO-1_scaffold_195815_6
CG_CPR13_01, CG_CPR13, Bacteria

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7570..9291
DNA (1722bp) protein (574aa)
fal:FRAAL0293 thrS; threonyl-tRNA synthetase (threonine--tRNA ligase) (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=96182 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Threonine-tRNA ligase
Tax=CG_CPR13_01
S35_SO-1_scaffold_195815_7
AR15, Woesearchaeaota, DPANN, Archaea

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9291..9794
DNA (504bp) protein (168aa)
id=5800315 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S35_SO-1_scaffold_195815_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9774..9983)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AF499
Tax=CG_Woesearch_02
S35_SO-1_scaffold_195815_9
AR18, Woesearchaeaota, DPANN, Archaea

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comp(9980..10720)
DNA (741bp) protein (247aa)
Diphthine synthase; K00586 diphthine synthase [EC:2.1.1.98] id=5047325 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
diphthine synthase (EC:2.1.1.98)
Tax=AR18
S35_SO-1_scaffold_195815_10
unknown

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comp(10705..11211)
DNA (507bp) protein (169aa)

This feature has no annotations

S35_SO-1_scaffold_195815_11
AR20, Woesearchaeaota, DPANN, Archaea

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11731..12396
DNA (666bp) protein (222aa)
Conserved TM helix repeat-containing protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TDU5_9CHLR id=5102941 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Conserved TM helix repeat-containing protein
Tax=AR20
S35_SO-1_scaffold_195815_12
unknown

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12454..12600
DNA (147bp) protein (49aa)

This feature has no annotations

S35_SO-1_scaffold_195815_13

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12587..15157
DNA (2571bp) protein (857aa)
calcium-translocating P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] id=5043592 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ca2+-transporting ATPase {ECO:0000313|EMBL:KHO46568.1}; EC=3.6.3.8 {ECO:0000313|EMBL:KHO46568.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Cation transport ATPase
S35_SO-1_scaffold_195815_14
unknown

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15286..15555
DNA (270bp) protein (90aa)

This feature has no annotations

S35_SO-1_scaffold_195815_15
unknown

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15570..15899
DNA (330bp) protein (110aa)

This feature has no annotations

S35_SO-1_scaffold_195815_16
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

comp(16013..16282)
DNA (270bp) protein (90aa)
hypothetical protein
ATP-cone id=5240959 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_OP11_39_9b_curated
S35_SO-1_scaffold_195815_17
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

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comp(16287..16997)
DNA (711bp) protein (237aa)
Putative uncharacterized protein id=2565646 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
cytochrome c biogenesis transmembrane protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
S35_SO-1_scaffold_195815_18
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

comp(16987..17772)
DNA (786bp) protein (262aa)
alias=gwc1_scaffold_1147_10 id=14424176 bin=bin11_novelCP species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=bin11_novelCP organism_group=Unknown_CP
hypothetical protein
Tax=RBG_16_OP11_39_9b_curated
S35_SO-1_scaffold_195815_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17901..18857)
DNA (957bp) protein (319aa)
K+-dependent Na+/Ca+ exchanger related-protein id=5800688 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
calcium/cation antiporter
Tax=CG_Woesearch_02
S35_SO-1_scaffold_195815_20
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

comp(19178..19819)
DNA (642bp) protein (214aa)
NADP oxidoreductase, coenzyme F420-dependent; K06988 id=24489635 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Rudaea cellulosilytica genus=Rudaea taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative NADP oxidoreductase, coenzyme F420-dependent
Tax=RBG_16_OP11_45_19_curated
S35_SO-1_scaffold_195815_trna_1
unknown

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comp(19879..19980)
DNA (102bp)
transferRNA Sup
S35_SO-1_scaffold_195815_21
unknown

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comp(20000..20287)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FCC27
S35_SO-1_scaffold_195815_22
unknown

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20804..21004
DNA (201bp) protein (67aa)

This feature has no annotations

S35_SO-1_scaffold_195815_23
unknown

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comp(21034..21594)
DNA (561bp) protein (187aa)

This feature has no annotations

S35_SO-1_scaffold_195815_24
GWC1_OD1_38_17, Parcubacteria, Bacteria

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comp(21643..22194)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B00D1
Uncharacterized protein {ECO:0000313|EMBL:KKQ58601.1}; TaxID=1618896 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_17.;"
S35_SO-1_scaffold_195815_25
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

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22245..23264
DNA (1020bp) protein (340aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RBG_13_RIF_OD1_07_42_11_curated
S35_SO-1_scaffold_195815_26
unknown

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comp(23254..23469)
DNA (216bp) protein (72aa)

This feature has no annotations

Displaying 27 items

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