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S35_SO-1_scaffold_241890

Search features with annotation key words

Displaying items 1-30 of 125 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_241890_1

Not on your lists

1..963
DNA (963bp) protein (321aa)
processing peptidase (EC:3.4.24.64) id=5041801 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
M16 family peptidase (EC:3.4.24.-)
Marine sediment metagenome DNA, contig: S01H1_L00186 {ECO:0000313|EMBL:GAF79717.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S35_SO-1_scaffold_241890_2
unknown

Not on your lists

comp(965..1300)
DNA (336bp) protein (112aa)

This feature has no annotations

S35_SO-1_scaffold_241890_3
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

1433..2407
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037380E1
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Tax=CG_Pacearch_05
S35_SO-1_scaffold_241890_4

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comp(2400..3788)
DNA (1389bp) protein (463aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5044939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B (EC:6.3.5.6)
S35_SO-1_scaffold_241890_5
unknown

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3891..4118
DNA (228bp) protein (76aa)

This feature has no annotations

S35_SO-1_scaffold_241890_6
AR15, Woesearchaeaota, DPANN, Archaea

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4108..5064
DNA (957bp) protein (319aa)
ATPase, AAA-type, core id=5799675 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
S35_SO-1_scaffold_241890_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

5066..5779
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000375EC05
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_241890_8
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

5784..6413
DNA (630bp) protein (210aa)
HAD family hydrolase; K06019 pyrophosphatase PpaX [EC:3.6.1.1] id=40853 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
HAD family hydrolase
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
S35_SO-1_scaffold_241890_9
unknown

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6474..6830
DNA (357bp) protein (119aa)

This feature has no annotations

S35_SO-1_scaffold_241890_10

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comp(6822..8213)
DNA (1392bp) protein (464aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO50649.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO50649.1};; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S35_SO-1_scaffold_241890_11

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comp(8210..8584)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AA799
Activating signal cointegrator 1 {ECO:0000313|EMBL:AIF10576.1}; TaxID=1456161 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_46_G10.;"
ASCH domain protein
S35_SO-1_scaffold_241890_12

Not on your lists

comp(8581..8865)
DNA (285bp) protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S35_SO-1_scaffold_241890_13
unknown

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comp(8855..9097)
DNA (243bp) protein (81aa)

This feature has no annotations

S35_SO-1_scaffold_241890_14
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9099..10103)
DNA (1005bp) protein (335aa)
mcm; ATP-dependent DNA helicase MCM (intein-containing) (EC:3.6.4.12)
Tax=RBG_13_Pacearchaeota_36_9_curated
S35_SO-1_scaffold_241890_15
unknown

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comp(10113..10412)
DNA (300bp) protein (100aa)

This feature has no annotations

S35_SO-1_scaffold_241890_16
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists


comp(10497..11831)
DNA (1335bp) protein (445aa)
Aspartate--tRNA ligase n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VST0_METIM id=5103862 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Aspartate-tRNA ligase
Tax=CG_Pacearch_04
S35_SO-1_scaffold_241890_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11783..12334)
DNA (552bp) protein (184aa)
hypothetical protein id=5047338 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
haloacid dehalogenase superfamily protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_241890_18
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

12528..12731
DNA (204bp) protein (68aa)
hypothetical protein
id=5102920 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR1
S35_SO-1_scaffold_241890_19
unknown

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12797..13156
DNA (360bp) protein (120aa)

This feature has no annotations

S35_SO-1_scaffold_241890_20
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13225..14418)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKD5_PYRSN id=5102913 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=AR20
S35_SO-1_scaffold_241890_21
unknown

Not on your lists

14503..14616
DNA (114bp) protein (38aa)

This feature has no annotations

S35_SO-1_scaffold_241890_22
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

14619..15146
DNA (528bp) protein (176aa)
peptidase M50 family id=5044074 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=AR18
S35_SO-1_scaffold_241890_23
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(15130..17370)
DNA (2241bp) protein (747aa)
cartilage oligomeric matrix protein id=5094845 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
S35_SO-1_scaffold_241890_24
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

comp(17367..19385)
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000379FB60
Tax=CG_CPArch01-01
S35_SO-1_scaffold_241890_25
unknown

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comp(19360..20070)
DNA (711bp) protein (237aa)

This feature has no annotations

S35_SO-1_scaffold_241890_26
unknown

Not on your lists

comp(20702..21763)
DNA (1062bp) protein (354aa)

This feature has no annotations

S35_SO-1_scaffold_241890_27
unknown

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comp(21823..22098)
DNA (276bp) protein (92aa)

This feature has no annotations

S35_SO-1_scaffold_241890_28
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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22191..23306
DNA (1116bp) protein (372aa)
transmembrane_regions id=5097585 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKR26373.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
hypothetical protein
S35_SO-1_scaffold_241890_29

Not on your lists

comp(23303..23821)
DNA (519bp) protein (173aa)
Marine sediment metagenome DNA, contig: S01H1_L06225 {ECO:0000313|EMBL:GAF73174.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
transcription factor E; K03136 transcription initiation factor TFIIE subunit alpha id=5041815 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription factor E
S35_SO-1_scaffold_241890_30
unknown

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23982..24176
DNA (195bp) protein (65aa)

This feature has no annotations

Displaying items 1-30 of 125 in total

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