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S35_SO-1_scaffold_336557

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_336557_1
GWA1_OD1_46_11_plus_minus, Nomurabacteria, Parcubacteria, Bacteria

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27..551
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU21772.1}; TaxID=1618732 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_46_11.;"
seg 105..114 id=85515 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
S35_SO-1_scaffold_336557_2
unknown

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631..801
DNA (171bp) protein (57aa)

This feature has no annotations

S35_SO-1_scaffold_336557_3

Not on your lists

894..1844
DNA (951bp) protein (317aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) RepID=D5VQH2_METIM
Magnesium transport protein CorA {ECO:0000313|EMBL:KKW23257.1}; TaxID=1618856 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_51_12.;"
magnesium and cobalt transport protein CorA
S35_SO-1_scaffold_336557_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1841..2164)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6A62
Conserved hypothetical membrane protein, peptidase family M50
Tax=AR20
S35_SO-1_scaffold_336557_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2463..2654)
DNA (192bp) protein (64aa)
Putative iron sulfur domain-containing protein, CDGSH-type n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKH0_NITGG
iron sulfur domain-containing protein, CDGSH-type
Putative iron sulfur domain-containing protein, CDGSH-type {ECO:0000313|EMBL:AFU59758.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
S35_SO-1_scaffold_336557_6
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2717..3040
DNA (324bp) protein (108aa)
Transcriptional regulator, HxlR family n=1 Tax=Mycobacterium marinum str. Europe RepID=S7SQJ2_MYCMR
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACC40076.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC BAA-535 / M).;"
S35_SO-1_scaffold_336557_7
RLO_RIF03_38_15, RIF3, Bacteria

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3084..3560
DNA (477bp) protein (159aa)
methionine-S-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Desmospora sp. 8437 RepID=F5SKU2_9BACL
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
S35_SO-1_scaffold_336557_8

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3561..4211
DNA (651bp) protein (217aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Ribonuclease n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWV0_9EURY id=5103472 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribonuclease
S35_SO-1_scaffold_336557_9

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4261..7674
DNA (3414bp) protein (1138aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003780A4C
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
chromosome segregation protein SMC
S35_SO-1_scaffold_336557_10
unknown

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comp(7685..8062)
DNA (378bp) protein (126aa)

This feature has no annotations

S35_SO-1_scaffold_336557_11
AR18, Woesearchaeaota, DPANN, Archaea

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comp(8100..9350)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Tax=AR18
S35_SO-1_scaffold_336557_12
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(9444..11504)
DNA (2061bp) protein (687aa)
UPI0003D1A52D related cluster n=1 Tax=unknown RepID=UPI0003D1A52D
Ig family protein
Tax=RBG_13_Planctomycetes_62_9_curated
S35_SO-1_scaffold_336557_13
unknown

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comp(11529..12182)
DNA (654bp) protein (218aa)

This feature has no annotations

S35_SO-1_scaffold_336557_trna_1
unknown

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comp(12296..12382)
DNA (87bp)
transferRNA Trp
S35_SO-1_scaffold_336557_14

Not on your lists

comp(12408..13178)
DNA (771bp) protein (257aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YHX0_THEYD
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:KHO51594.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
S35_SO-1_scaffold_336557_15
RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

13216..14064
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0003108BDE
Tax=RIFOXYB1_FULL_OD1_Magasanikbacteria_40_15_curated
S35_SO-1_scaffold_336557_16
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14098..15606
DNA (1509bp) protein (503aa)
DSBA-like thioredoxin domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D7G6_MYXXD
DSBA oxidoreductase {ECO:0000313|EMBL:KFA91418.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
DSBA oxidoreductase
S35_SO-1_scaffold_336557_17

Not on your lists

15608..16075
DNA (468bp) protein (156aa)
Putative uncharacterized protein id=2823235 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
Uncharacterized protein {ECO:0000313|EMBL:KKW24917.1}; TaxID=1620413 species="Bacteria.;" source="bacterium GW2011_GWC1_52_13.;"
hypothetical protein
S35_SO-1_scaffold_336557_18
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

16311..16832
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003771F93
hypothetical protein
Tax=CG_Pacearch_04
S35_SO-1_scaffold_336557_19

Not on your lists

16902..17402
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380F1AA
Uncharacterized protein {ECO:0000313|EMBL:KHO54533.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
hypothetical protein
S35_SO-1_scaffold_336557_20
unknown

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17414..17596
DNA (183bp) protein (61aa)

This feature has no annotations

S35_SO-1_scaffold_336557_21
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

17598..18197
DNA (600bp) protein (200aa)
Uncharacterized protein id=5800406 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Pacearch_02
S35_SO-1_scaffold_336557_22

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18237..20438
DNA (2202bp) protein (734aa)
Cu(2+)-binding/translocating P-type ATPase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4B5_UNCMA id=5103507 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cu(2+)-binding/translocating P-type ATPase
Cu(2+)-binding/translocating P-type ATPase {ECO:0000313|EMBL:AJF62788.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S35_SO-1_scaffold_336557_23

Not on your lists

comp(20468..21307)
DNA (840bp) protein (280aa)
UPI0001E2D0E8 related cluster n=1 Tax=unknown RepID=UPI0001E2D0E8 id=5103537 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62818.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S35_SO-1_scaffold_336557_24
R_OP11_Roizmanbacteria_39_24, Roizmannbacteria, Microgenomates, Bacteria

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comp(21670..23169)
DNA (1500bp) protein (500aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_24_curated
Displaying 25 items

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