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S35_SO-1_scaffold_598402

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_598402_1
unknown

Not on your lists

comp(3..761)
DNA (759bp) protein (253aa)

This feature has no annotations

S35_SO-1_scaffold_598402_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(908..1330)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003771515
Putative nucleotide-binding protein {ECO:0000313|EMBL:KCZ71322.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Nucleotide-binding protein, PIN domain-containing protein
S35_SO-1_scaffold_598402_3
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1327..1554)
DNA (228bp) protein (76aa)
hypothetical protein id=5048108 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S35_SO-1_scaffold_598402_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

1842..2858
DNA (1017bp) protein (339aa)
hypothetical protein
id=5103601 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S35_SO-1_scaffold_598402_5

Not on your lists

2978..3376
DNA (399bp) protein (133aa)
seg 73..92 id=13003 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Uncharacterized protein {ECO:0000313|EMBL:EKE06884.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
S35_SO-1_scaffold_598402_6
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3390..4712)
DNA (1323bp) protein (441aa)
Tax=AR17
S35_SO-1_scaffold_598402_7
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(4737..6383)
DNA (1647bp) protein (549aa)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPR9_THELI id=5103639 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase beta subunit
Tax=AR20
S35_SO-1_scaffold_598402_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(6385..7893)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037CA4E5
Phenylalanine-tRNA ligase alpha subunit
Tax=CG_Woesearch_02
S35_SO-1_scaffold_598402_9
unknown

Not on your lists

comp(7945..8262)
DNA (318bp) protein (106aa)

This feature has no annotations

S35_SO-1_scaffold_598402_10
unknown

Not on your lists

comp(8269..8736)
DNA (468bp) protein (156aa)

This feature has no annotations

S35_SO-1_scaffold_598402_11
unknown

Not on your lists

comp(8738..9130)
DNA (393bp) protein (131aa)

This feature has no annotations

S35_SO-1_scaffold_598402_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9127..9930)
DNA (804bp) protein (268aa)
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_598402_13
unknown

Not on your lists

comp(9927..10373)
DNA (447bp) protein (149aa)

This feature has no annotations

S35_SO-1_scaffold_598402_14

Not on your lists

comp(10484..11161)
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036DB9B1
Marine sediment metagenome DNA, contig: S01H1_L00623 {ECO:0000313|EMBL:GAF85285.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Tryptophan-tRNA ligase
S35_SO-1_scaffold_598402_15
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(11127..11537)
DNA (411bp) protein (137aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] id=5049690 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tax=CG_Pacearch_04
S35_SO-1_scaffold_598402_16
unknown

Not on your lists

comp(11578..12285)
DNA (708bp) protein (236aa)

This feature has no annotations

S35_SO-1_scaffold_598402_17
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12341..13921)
DNA (1581bp) protein (527aa)
ABC-2 type transporter n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EED0_9EURY id=5103646 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC-2 type transporter
Tax=AR20
S35_SO-1_scaffold_598402_18
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13918..14853)
DNA (936bp) protein (312aa)
ABC-type multidrug transport system, ATP-ase compoment CAC0241 n=2 Tax=Clostridium RepID=A0PYE1_CLONN id=5103647 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ABC-type multidrug transport system, ATP-ase compoment
Tax=AR17
S35_SO-1_scaffold_598402_19
Ferroplasma sp. Type II, Ferroplasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14955..15173
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0M7E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB72914.1}; TaxID=261388 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; Ferroplasmaceae; Ferroplasma; environmental samples.;" source="Ferroplasma sp. Type II.;"
hypothetical protein
S35_SO-1_scaffold_598402_20

Not on your lists

15174..15422
DNA (249bp) protein (83aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Thermoplasmatales archaeon A-plasma RepID=T0LVN9_9EURY
RelE protein {ECO:0000313|EMBL:KHO51702.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RelE protein
S35_SO-1_scaffold_598402_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15509..16225
DNA (717bp) protein (239aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pyrococcus sp. ST04 RepID=I3RFB4_9EURY id=5103026 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidyl-prolyl cis-trans isomerase
Tax=CG_Woesearch_02
S35_SO-1_scaffold_598402_22

Not on your lists

16200..16667
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT26206.1}; TaxID=1618828 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_9b.;"
Putative uncharacterized protein id=3027234 bin=GWC1_CPR2_39_9 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
S35_SO-1_scaffold_598402_23

Not on your lists

16664..17062
DNA (399bp) protein (133aa)
NUDIX hydrolase n=1 Tax=uncultured bacterium RepID=K1Z279_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:EKD43577.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Isoleucine-tRNA ligase
S35_SO-1_scaffold_598402_24
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

17171..18241
DNA (1071bp) protein (357aa)
Cell division protein FtsZ n=1 Tax=sediment metagenome RepID=D9PEV5_9ZZZZ id=5103027 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cell division protein FtsZ
Tax=AR20
S35_SO-1_scaffold_598402_25
unknown

Not on your lists

comp(18244..18558)
DNA (315bp) protein (105aa)

This feature has no annotations

S35_SO-1_scaffold_598402_26
Methanosphaera stadtmanae, Methanosphaera, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

18675..18860
DNA (186bp) protein (62aa)
Protein translocase subunit SecE n=1 Tax=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) RepID=SECE_METST
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000255|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000255|HAMAP-Rule:MF_00422}; TaxID=339860 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanosphaera.;" source="Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 /; MCB-3).;"
S35_SO-1_scaffold_598402_27

Not on your lists


18862..19329
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003807E84
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
LSU ribosomal protein L24A Rpl24A
S35_SO-1_scaffold_598402_28
GWA1_WWE3_41_8, WWE3, Bacteria

Not on your lists


19331..20086
DNA (756bp) protein (252aa)
LSU ribosomal protein L11P n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXB4_METFV id=5103030 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L11P {ECO:0000313|EMBL:KKS22611.1}; Flags: Fragment;; TaxID=1619103 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWA1_41_8.;"
LSU ribosomal protein L11P
S35_SO-1_scaffold_598402_29
unknown

Not on your lists

comp(20088..20384)
DNA (297bp) protein (99aa)

This feature has no annotations

S35_SO-1_scaffold_598402_30
unknown

Not on your lists

comp(20368..20661)
DNA (294bp) protein (98aa)

This feature has no annotations

Displaying items 1-30 of 94 in total

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