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S35_SO-1_scaffold_22397

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_22397_1
AR11, Woesearchaeaota, DPANN, Archaea

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2..130
DNA (129bp) protein (43aa)
fadA1; 3-ketoacyl-CoA thiolase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase (Fragment) n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T7W6_9EURY
Tax=AR11
S35_SO-1_scaffold_22397_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

138..1112
DNA (975bp) protein (325aa)
Tax=AR11
S35_SO-1_scaffold_22397_3

Not on your lists

1133..1867
DNA (735bp) protein (245aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:KHO50308.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KHO50308.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
fabG2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RRJ8_9CLOT
S35_SO-1_scaffold_22397_4

Not on your lists

1957..2316
DNA (360bp) protein (120aa)
hypothetical protein id=5046761 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45949.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S35_SO-1_scaffold_22397_5

Not on your lists

2380..2907
DNA (528bp) protein (176aa)
2'-5' RNA ligase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RWJ4_FERPA
Marine sediment metagenome DNA, contig: S01H1_L00584 {ECO:0000313|EMBL:GAF84965.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
2'-5' RNA ligase
S35_SO-1_scaffold_22397_6
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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3097..3696
DNA (600bp) protein (200aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKR78388.1}; Flags: Fragment;; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
30S ribosomal protein S2 id=5799985 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S2
S35_SO-1_scaffold_22397_7
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3721..4701)
DNA (981bp) protein (327aa)
gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000313|EMBL:KKR78534.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] id=3437531 bin=GWC2_Deltaproteobacteria_42_51 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
S35_SO-1_scaffold_22397_8
GWA2_OP11_35_8_partial, Roizmanbacteria, Microgenomates, Bacteria

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comp(4707..5030)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP87231.1}; TaxID=1618479 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_35_8.;"
id=5085143 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
S35_SO-1_scaffold_22397_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5068..5703)
DNA (636bp) protein (212aa)
1-acylglycerol-3-phosphate O-acyltransferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase (Fragment) n=1 Tax=Frankia sp. QA3 RepID=I9KQ38_9ACTO
Tax=AR11
S35_SO-1_scaffold_22397_10
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5705..6343)
DNA (639bp) protein (213aa)
Acyltransferase n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YNV9_9MICO
Acyltransferase family protein {ECO:0000313|EMBL:KKR78391.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
acyltransferase family protein
S35_SO-1_scaffold_22397_11

Not on your lists

comp(6414..7427)
DNA (1014bp) protein (338aa)
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5046762 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
radA; DNA repair and recombination protein RadA
S35_SO-1_scaffold_22397_12

Not on your lists

comp(7471..7770)
DNA (300bp) protein (100aa)
id=5046763 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45951.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S35_SO-1_scaffold_22397_13
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(8161..9156)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CEL9_STRBB
hypothetical protein
Tax=CG_Arma_02
S35_SO-1_scaffold_22397_14
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9153..11774)
DNA (2622bp) protein (874aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UGU5_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:EFV81835.1}; TaxID=562971 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans C54.;"
endonuclease
S35_SO-1_scaffold_22397_15
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11778..13142)
DNA (1365bp) protein (455aa)
Putative uncharacterized protein n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5UGU4_ALCXX
Uncharacterized protein {ECO:0000313|EMBL:KKQ76874.1}; TaxID=1618432 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
hypothetical protein
S35_SO-1_scaffold_22397_16
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13185..14423)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Brevibacillus laterosporus PE36 RepID=U4WTP1_BRELA
Cytosine methyltransferase {ECO:0000313|EMBL:AKF93466.1}; TaxID=1465 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus (Bacillus laterosporus).;"
DNA-methyltransferase Dcm
S35_SO-1_scaffold_22397_17
Methanolacinia petrolearia, Methanolacinia, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14469..14885)
DNA (417bp) protein (139aa)
DNA mismatch endonuclease Vsr n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RKA3_METP4
DNA mismatch endonuclease Vsr
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:ADN36916.1}; TaxID=679926 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanolacinia.;" source="Methanolacinia petrolearia (strain DSM 11571 / OCM 486 / SEBR 4847); (Methanoplanus petrolearius).;"
S35_SO-1_scaffold_22397_18
unknown

Not on your lists

comp(14887..15555)
DNA (669bp) protein (223aa)

This feature has no annotations

S35_SO-1_scaffold_22397_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15971..16804)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DK41_9BACT
hypothetical protein
Tax=AR17
S35_SO-1_scaffold_22397_20

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comp(16909..17898)
DNA (990bp) protein (330aa)
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 id=5046768 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Replication factor A1 {ECO:0000313|EMBL:KHO45956.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Nucleic acid binding OB-fold tRNA/helicase-type
S35_SO-1_scaffold_22397_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17940..19721)
DNA (1782bp) protein (594aa)
Tax=AR11
S35_SO-1_scaffold_22397_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19723..20865)
DNA (1143bp) protein (381aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ACZ90533.1}; EC=3.5.1.28 {ECO:0000313|EMBL:ACZ90533.1};; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AU78_STRRD
S35_SO-1_scaffold_22397_23
unknown

Not on your lists

comp(20862..21377)
DNA (516bp) protein (172aa)
hypothetical protein
S35_SO-1_scaffold_22397_24
unknown

Not on your lists

comp(21382..21894)
DNA (513bp) protein (171aa)

This feature has no annotations

S35_SO-1_scaffold_22397_25
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21888..22343)
DNA (456bp) protein (152aa)
Tax=AR11
S35_SO-1_scaffold_22397_26
unknown

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comp(22397..23086)
DNA (690bp) protein (230aa)

This feature has no annotations

S35_SO-1_scaffold_22397_27
unknown

Not on your lists

comp(23083..23427)
DNA (345bp) protein (115aa)

This feature has no annotations

S35_SO-1_scaffold_22397_28
unknown

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comp(23376..24539)
DNA (1164bp) protein (388aa)

This feature has no annotations

S35_SO-1_scaffold_22397_29
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(24713..25888)
DNA (1176bp) protein (392aa)
Tax=AR11
S35_SO-1_scaffold_22397_30

Not on your lists

comp(26013..26276)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50773.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
id=5046782 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Displaying items 1-30 of 102 in total

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