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S35_SO-1_scaffold_116036

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_116036_1
AR11, Woesearchaeaota, DPANN, Archaea

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2..526
DNA (525bp) protein (175aa)
Methyltransferase small id=5800230 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal RNA small subunit methyltransferase C
Tax=AR11
S35_SO-1_scaffold_116036_2
unknown

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comp(563..1426)
DNA (864bp) protein (288aa)

This feature has no annotations

S35_SO-1_scaffold_116036_3
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(1461..2294)
DNA (834bp) protein (278aa)
Putative ribose 1,5-bisphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00304}; EC=5.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00304};; Ribulose 1,5-bisphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00304}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
Putative ribose 1,5-bisphosphate isomerase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QAU0_METFO
thiazole biosynthesis protein
S35_SO-1_scaffold_116036_4
AR20, Woesearchaeaota, DPANN, Archaea

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comp(2363..2719)
DNA (357bp) protein (119aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S35_SO-1_scaffold_116036_5
AR15, Woesearchaeaota, DPANN, Archaea

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comp(2778..3407)
DNA (630bp) protein (210aa)
Uncharacterized protein id=5800233 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
peptidase S54, rhomboid family protein
Tax=AR15
S35_SO-1_scaffold_116036_6
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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comp(3404..3724)
DNA (321bp) protein (107aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=5044274 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
transcriptional coactivator/pterin dehydratase
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
S35_SO-1_scaffold_116036_7

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comp(3749..4192)
DNA (444bp) protein (148aa)
NUDIX hydrolase n=2 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AET2_9EURY
Marine sediment metagenome DNA, contig: S01H1_S25777 {ECO:0000313|EMBL:GAG36946.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
mutT/nudix family protein
S35_SO-1_scaffold_116036_8
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

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4431..5039
DNA (609bp) protein (203aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ64456.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_38_24.;"
id=5043675 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S35_SO-1_scaffold_116036_9
CG_Woesearch_01, Woesearchaeota, Archaea

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5027..5509
DNA (483bp) protein (161aa)
HEPN id=5043676 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=CG_Woesearch_01
S35_SO-1_scaffold_116036_10
unknown

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5538..5714
DNA (177bp) protein (59aa)

This feature has no annotations

S35_SO-1_scaffold_116036_11

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6107..7825
DNA (1719bp) protein (573aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
CTP synthase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B51BBE
S35_SO-1_scaffold_116036_12

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7813..8844
DNA (1032bp) protein (344aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein-export membrane protein SecF
S35_SO-1_scaffold_116036_13
AR11, Woesearchaeaota, DPANN, Archaea

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8841..10520
DNA (1680bp) protein (560aa)
hypothetical protein; K03072 preprotein translocase subunit SecD id=5047439 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SecD/SecF/SecDF export membrane protein
Tax=AR11
S35_SO-1_scaffold_116036_14
unknown

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10589..10879
DNA (291bp) protein (97aa)

This feature has no annotations

S35_SO-1_scaffold_116036_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10892..11215
DNA (324bp) protein (108aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_116036_16
unknown

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comp(11231..11437)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying 16 items

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