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S35_SO-1_scaffold_200031

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_200031_1
Glaciecola nitratireducens, Glaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..294
DNA (294bp) protein (98aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=1085623 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Glaciecola.;" source="Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064).;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) RepID=G4QNA3_GLANF
wrbA; flavoprotein WrbA
S35_SO-1_scaffold_200031_2
unknown

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comp(250..375)
DNA (126bp) protein (42aa)

This feature has no annotations

S35_SO-1_scaffold_200031_3
AR9, Woesearchaeaota, DPANN, Archaea

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547..1638
DNA (1092bp) protein (364aa)
Glucokinase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLG5_METH6
glucokinase
Tax=AR9
S35_SO-1_scaffold_200031_4
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1635..3563
DNA (1929bp) protein (643aa)
Glycoside hydrolase 15-related protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6C5_METEZ
glycoside hydrolase 15-like protein
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:ADI73147.1}; TaxID=644295 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanohalobium.;" source="Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303).;"
S35_SO-1_scaffold_200031_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3604..3960)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46BB8_METBF
Transcriptional regulator, HxlR family
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AKB52104.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
S35_SO-1_scaffold_200031_6
R_RIF_OD1_03_45_10, RIF-OD1-3, Parcubacteria, Bacteria

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4189..4665
DNA (477bp) protein (159aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_45_10_curated
S35_SO-1_scaffold_200031_7
R_Nitrospirae_40_19, Nitrospirae, Bacteria

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4659..4820
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363B5ED
Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
S35_SO-1_scaffold_200031_8
CG_Pacearch_06, Pacearchaeota, Archaea

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4881..5240
DNA (360bp) protein (120aa)
ArsR family transcriptional regulator id=5044094 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ArsR family transcriptional regulator
Tax=CG_Pacearch_06
S35_SO-1_scaffold_200031_9
unknown

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5237..5434
DNA (198bp) protein (66aa)

This feature has no annotations

S35_SO-1_scaffold_200031_10
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

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5475..5888
DNA (414bp) protein (138aa)
Methyltransferase type 11 id=5800459 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
methyltransferase
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
S35_SO-1_scaffold_200031_11
unknown

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comp(5838..6044)
DNA (207bp) protein (69aa)

This feature has no annotations

S35_SO-1_scaffold_200031_12

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comp(6013..6975)
DNA (963bp) protein (321aa)
Thioredoxin reductase (TrxB-3) n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A2G0_FERFK id=5103529 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Thioredoxin reductase TrxB-3
Thioredoxin reductase TrxB-3 {ECO:0000313|EMBL:AJF62810.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
S35_SO-1_scaffold_200031_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6980..7258)
DNA (279bp) protein (93aa)
Glutaredoxin-like protein, YruB-family id=2698725 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
YruB family glutaredoxin-like protein
Tax=AR11
S35_SO-1_scaffold_200031_14
unknown

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comp(7311..7430)
DNA (120bp) protein (40aa)

This feature has no annotations

S35_SO-1_scaffold_200031_trna_1
unknown

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comp(8105..8233)
DNA (129bp)
transferRNA Leu
S35_SO-1_scaffold_200031_15
unknown

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8388..9257
DNA (870bp) protein (290aa)

This feature has no annotations

S35_SO-1_scaffold_200031_16
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(9281..9793)
DNA (513bp) protein (171aa)
Tax=CG_Woesearch_03
S35_SO-1_scaffold_200031_17

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comp(9797..10324)
DNA (528bp) protein (176aa)
Marine sediment metagenome DNA, contig: S01H1_S08790 {ECO:0000313|EMBL:GAG12683.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
S35_SO-1_scaffold_200031_18
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(10338..10901)
DNA (564bp) protein (188aa)
Tax=CG_Woesearch_03
S35_SO-1_scaffold_200031_19
AR11, Woesearchaeaota, DPANN, Archaea

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10995..12425
DNA (1431bp) protein (477aa)
transmembrane_regions id=5043982 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S35_SO-1_scaffold_200031_20

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comp(12422..12568)
DNA (147bp) protein (49aa)
id=5050136 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45069.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S35_SO-1_scaffold_200031_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12767..12991)
DNA (225bp) protein (75aa)
id=5044625 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
S35_SO-1_scaffold_200031_22
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(12996..13601)
DNA (606bp) protein (202aa)
id=5044624 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
S35_SO-1_scaffold_200031_23

Not on your lists


13765..14289
DNA (525bp) protein (175aa)
Ribosomal protein L16 {ECO:0000313|EMBL:KHO51722.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L10e id=5800536 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L10e
S35_SO-1_scaffold_200031_24
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

14332..15390
DNA (1059bp) protein (353aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003804E87
MscS mechanosensitive ion channel
Tax=CG_Pacearch_01
S35_SO-1_scaffold_200031_25
unknown

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comp(15394..15513)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 26 items

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