ggKbase home page

S35_SO-1_scaffold_349317

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_349317_1
unknown

Not on your lists

457..957
DNA (501bp) protein (167aa)

This feature has no annotations

S35_SO-1_scaffold_349317_2
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(944..1303)
DNA (360bp) protein (120aa)
hypothetical protein n=2 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003734773
Uncharacterized protein {ECO:0000313|EMBL:KKQ84176.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
S23 ribosomal protein
S35_SO-1_scaffold_349317_3

Not on your lists

1957..2772
DNA (816bp) protein (272aa)
phage integrase family protein id=5043988 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Phage integrase family protein {ECO:0000313|EMBL:KHO46978.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Phage integrase family protein
S35_SO-1_scaffold_349317_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2767..3276)
DNA (510bp) protein (170aa)
seg id=5799965 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
S35_SO-1_scaffold_349317_5

Not on your lists

comp(3423..3974)
DNA (552bp) protein (184aa)
Marine sediment metagenome DNA, contig: S01H1_S21807 {ECO:0000313|EMBL:GAG16603.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5047513 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S35_SO-1_scaffold_349317_6

Not on your lists

comp(4054..4725)
DNA (672bp) protein (224aa)
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S35_SO-1_scaffold_349317_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

5211..5864
DNA (654bp) protein (218aa)
RNA methylase id=5799774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_349317_8
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

5921..6199
DNA (279bp) protein (93aa)
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L
Tax=CG_Woesearch_01
S35_SO-1_scaffold_349317_9
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6301..6822
DNA (522bp) protein (174aa)
id=5041897 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S35_SO-1_scaffold_349317_10
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

6785..7549
DNA (765bp) protein (255aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UPZ0_METVS id=5103830 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
Tax=AR20
S35_SO-1_scaffold_349317_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

7618..9039
DNA (1422bp) protein (474aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phosphoesterase, RecJ-like protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_349317_12
unknown

Not on your lists

9044..9205
DNA (162bp) protein (54aa)

This feature has no annotations

S35_SO-1_scaffold_349317_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9224..9496)
DNA (273bp) protein (91aa)
regulatory protein MarR id=5043998 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR4
S35_SO-1_scaffold_349317_14
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

Not on your lists

comp(9607..10167)
DNA (561bp) protein (187aa)
Uncharacterized protein id=4010368 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein HGP-15 {ECO:0000313|EMBL:BAE95215.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Nitrosocaldus sp.;"
exported protein of unknown function
S35_SO-1_scaffold_349317_15

Not on your lists

comp(10164..11393)
DNA (1230bp) protein (410aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49639.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
seg id=5041707 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S35_SO-1_scaffold_349317_16
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11457..11927)
DNA (471bp) protein (157aa)
seg id=5041709 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Vitamin K epoxide reductase
Tax=AR9
S35_SO-1_scaffold_349317_17
unknown

Not on your lists

comp(11965..12177)
DNA (213bp) protein (71aa)

This feature has no annotations

S35_SO-1_scaffold_349317_18
unknown

Not on your lists

comp(12197..12403)
DNA (207bp) protein (69aa)
id=4010371 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
S35_SO-1_scaffold_349317_19

Not on your lists

comp(12446..13537)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW137N13 RepID=B3T4X3_9ARCH id=725233 bin=RAAC2_WWE3 species=uncultured marine crenarchaeote HF4000_ANIW137N13 genus=unknown taxon_order=Nitrosopumilales taxon_class=unknown phylum=Thaumarchaeota tax=RAAC2_WWE3 organism_group=WWE3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB40133.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
S35_SO-1_scaffold_349317_20
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(13665..14378)
DNA (714bp) protein (238aa)
Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV45_RUBXD
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGM38236.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
cytochrome c biogenesis protein, transmembrane region
S35_SO-1_scaffold_349317_21
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(14380..14904)
DNA (525bp) protein (175aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW2_THET1
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACZ42983.1}; Flags: Precursor;; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Displaying 21 items

View Taxonomy