ggKbase home page

S35_SO-1_scaffold_480714

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_480714_1
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22..381
DNA (360bp) protein (120aa)
hypothetical protein n=2 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003734773
S23 ribosomal
Tax=RBG_16_Deltaproteobacteria_54_11_curated
S35_SO-1_scaffold_480714_2
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(503..1159)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSN1_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA68103.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
S35_SO-1_scaffold_480714_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1164..2495)
DNA (1332bp) protein (444aa)
Uncharacterized protein id=5799652 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S35_SO-1_scaffold_480714_4
unknown

Not on your lists

comp(2945..3097)
DNA (153bp) protein (51aa)

This feature has no annotations

S35_SO-1_scaffold_480714_5
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(3130..3558)
DNA (429bp) protein (143aa)
hypothetical protein
hypothetical protein; K09005 hypothetical protein id=5095910 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
S35_SO-1_scaffold_480714_6

Not on your lists

4304..5098
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51311.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
S35_SO-1_scaffold_480714_7
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5101..5547)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035E0D8C
putative signaling protein
Putative signaling protein {ECO:0000313|EMBL:BAI60879.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
S35_SO-1_scaffold_480714_8
unknown

Not on your lists

6303..6647
DNA (345bp) protein (115aa)

This feature has no annotations

S35_SO-1_scaffold_480714_9

Not on your lists

7002..7460
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK57386.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S35_SO-1_scaffold_480714_10
unknown

Not on your lists

7748..7933
DNA (186bp) protein (62aa)

This feature has no annotations

S35_SO-1_scaffold_480714_11

Not on your lists

7935..8201
DNA (267bp) protein (89aa)
Putative uncharacterized protein id=5048508 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45542.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
RelE; hypothetical protein
S35_SO-1_scaffold_480714_12
unknown

Not on your lists

8333..8713
DNA (381bp) protein (127aa)

This feature has no annotations

S35_SO-1_scaffold_480714_13
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(8779..9489)
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAK5_METMS id=5103592 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_01
S35_SO-1_scaffold_480714_14
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9529..10311)
DNA (783bp) protein (261aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
Glutamate 5-kinase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TBV9_HELMI
proB; gamma-glutamyl kinase
S35_SO-1_scaffold_480714_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10313..11620)
DNA (1308bp) protein (436aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXL2_CLOCD
S35_SO-1_scaffold_480714_16

Not on your lists

comp(11617..12414)
DNA (798bp) protein (266aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BW96_9FIRM
Marine sediment metagenome DNA, contig: S01H1_S05363 {ECO:0000313|EMBL:GAG03789.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S35_SO-1_scaffold_480714_17

Not on your lists

12556..13377
DNA (822bp) protein (274aa)
High-affinity iron transporter {ECO:0000313|EMBL:KKS33598.1}; TaxID=1618926 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;"
high-affinity iron transporter; K07243 high-affinity iron transporter id=5046616 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
high-affinity iron transporter
S35_SO-1_scaffold_480714_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

13420..16107
DNA (2688bp) protein (896aa)
Putative type IV restriction endonuclease n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IB27_METCZ
type IV restriction endonuclease
Tax=AR11
S35_SO-1_scaffold_480714_19
unknown

Not on your lists

16104..16475
DNA (372bp) protein (124aa)

This feature has no annotations

S35_SO-1_scaffold_480714_20
unknown

Not on your lists

16566..16805
DNA (240bp) protein (80aa)

This feature has no annotations

S35_SO-1_scaffold_480714_21
unknown

Not on your lists

16827..17267
DNA (441bp) protein (147aa)

This feature has no annotations

S35_SO-1_scaffold_480714_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

17315..17482
DNA (168bp) protein (56aa)
Tax=AR11
S35_SO-1_scaffold_480714_23
unknown

Not on your lists

comp(17655..18161)
DNA (507bp) protein (169aa)

This feature has no annotations

S35_SO-1_scaffold_480714_24
unknown

Not on your lists

comp(18233..18382)
DNA (150bp) protein (50aa)

This feature has no annotations

S35_SO-1_scaffold_480714_25

Not on your lists

18475..18759
DNA (285bp) protein (95aa)
regulatory protein ArsR id=5048647 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Regulatory protein ArsR {ECO:0000313|EMBL:KHO45310.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S35_SO-1_scaffold_480714_26

Not on your lists

18788..19075
DNA (288bp) protein (96aa)
Uncharacterized protein id=5048646 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45309.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S35_SO-1_scaffold_480714_27
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

19087..19848
DNA (762bp) protein (254aa)
alias=gwa2_scaffold_521_195 id=18248389 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
thioredoxin protein
Tax=AR11
S35_SO-1_scaffold_480714_28
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

19850..20584
DNA (735bp) protein (245aa)
cytochrome c biogenesis protein (EC:4.4.1.17); K06196 cytochrome c-type biogenesis protein id=5044653 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cytochrome c-type biogenesis protein (EC:4.4.1.17)
Tax=AR11
S35_SO-1_scaffold_480714_29
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20617..21711
DNA (1095bp) protein (365aa)
Thiol-disulfide isomerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX2_NITGG
thiol-disulfide isomerase-like thioredoxin
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:AIF85320.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
S35_SO-1_scaffold_480714_30

Not on your lists

21718..22278
DNA (561bp) protein (187aa)
Thiol-disulfide oxidoreductase {ECO:0000313|EMBL:KHO52429.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
alkyl hydroperoxide reductase id=18247962 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
alkyl hydroperoxide reductase
Displaying items 1-30 of 34 in total

View Taxonomy