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S35_SO-1_scaffold_224143

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_224143_1
CG_Woesearch_02, Woesearchaeota, Archaea

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235..1470
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HKD5_PYRSN id=5102913 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_224143_2

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comp(1486..2127)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EQC6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE07834.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
S35_SO-1_scaffold_224143_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2190..2591
DNA (402bp) protein (134aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
2-isopropylmalate synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC99_CHIPD
2-isopropylmalate synthase
S35_SO-1_scaffold_224143_4
AR11, Woesearchaeaota, DPANN, Archaea

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comp(2595..5120)
DNA (2526bp) protein (842aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase id=5799660 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
S35_SO-1_scaffold_224143_5
unknown

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5215..5493
DNA (279bp) protein (93aa)

This feature has no annotations

S35_SO-1_scaffold_224143_6

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5471..7393
DNA (1923bp) protein (641aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29080_ARCFU id=5103280 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S03H2_S22255 {ECO:0000313|EMBL:GAH87286.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S35_SO-1_scaffold_224143_7
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(7417..7818)
DNA (402bp) protein (134aa)
Tax=CG_Woesearch_03
S35_SO-1_scaffold_224143_8
unknown

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comp(7815..8087)
DNA (273bp) protein (91aa)

This feature has no annotations

S35_SO-1_scaffold_224143_9
CG_CPR16-01, CG_CPR16, Bacteria

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8194..8832
DNA (639bp) protein (213aa)
Phosphoribosyltransferase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYG1_THEOJ
phosphoribosyltransferase
Tax=CG_CPR16-01
S35_SO-1_scaffold_224143_10
unknown

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8840..9208
DNA (369bp) protein (123aa)

This feature has no annotations

S35_SO-1_scaffold_224143_11
AR20, Woesearchaeaota, DPANN, Archaea

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9256..10458
DNA (1203bp) protein (401aa)
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML id=5103851 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transporter, monovalent cation:proton antiporter-2 family protein
Tax=AR20
S35_SO-1_scaffold_224143_12
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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comp(10469..10672)
DNA (204bp) protein (68aa)
hypothetical protein id=16829963 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Translation elongation factor-like protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
S35_SO-1_scaffold_224143_13

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comp(10912..11910)
DNA (999bp) protein (333aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin reductase NADPH {ECO:0000313|EMBL:KHO46790.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KHO46790.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Thioredoxin reductase TrxB-3
S35_SO-1_scaffold_224143_14

Not on your lists

comp(12132..13313)
DNA (1182bp) protein (394aa)
malate dehydrogenase oxaloacetate-decarboxylating (EC:1.1.1.38)
Uncharacterized protein {ECO:0000313|EMBL:KHO53634.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Malate dehydrogenase (Oxaloacetate-decarboxylating) id=2698727 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
S35_SO-1_scaffold_224143_15
unknown

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comp(13367..13798)
DNA (432bp) protein (144aa)

This feature has no annotations

S35_SO-1_scaffold_224143_16
AR11, Woesearchaeaota, DPANN, Archaea

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comp(13898..15301)
DNA (1404bp) protein (468aa)
pykF; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Leptonema illini DSM 21528 RepID=H2CLJ7_9LEPT
Tax=AR11
S35_SO-1_scaffold_224143_17

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comp(15400..15960)
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52503.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Prophage antirepressor id=4939940 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
phage antirepressor protein
Displaying 17 items

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