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S35_SO-1_scaffold_291090

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_291090_1
RLO_PLX_64_10, Bacteria

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1..633
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
S35_SO-1_scaffold_291090_2
unknown

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comp(639..863)
DNA (225bp) protein (75aa)

This feature has no annotations

S35_SO-1_scaffold_291090_3
unknown

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882..1055
DNA (174bp) protein (58aa)

This feature has no annotations

S35_SO-1_scaffold_291090_4
AR20, Woesearchaeaota, DPANN, Archaea

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1209..1727
DNA (519bp) protein (173aa)
hypothetical protein
id=5103172 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
S35_SO-1_scaffold_291090_5

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1724..2548
DNA (825bp) protein (275aa)
phage integrase family protein id=5043988 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Phage integrase family protein {ECO:0000313|EMBL:KHO46978.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
Phage integrase family protein
S35_SO-1_scaffold_291090_6

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comp(2543..3112)
DNA (570bp) protein (190aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51023.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
seg id=5799965 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S35_SO-1_scaffold_291090_7

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comp(3239..3724)
DNA (486bp) protein (162aa)
Marine sediment metagenome DNA, contig: S01H1_S21807 {ECO:0000313|EMBL:GAG16603.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Helix-turn-helix, type 11 id=5043991 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
S35_SO-1_scaffold_291090_8

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comp(3841..4509)
DNA (669bp) protein (223aa)
Marine sediment metagenome DNA, contig: S01H1_L02580 {ECO:0000313|EMBL:GAF77680.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
S35_SO-1_scaffold_291090_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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4940..5575
DNA (636bp) protein (212aa)
RNA methylase id=5799774 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA methylase
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_291090_10
CG_Woesearch_02, Woesearchaeota, Archaea

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5622..5900
DNA (279bp) protein (93aa)
DNA-directed RNA polymerase subunit L id=5799914 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit L
Tax=CG_Woesearch_02
S35_SO-1_scaffold_291090_11
AR4, Woesearchaeaota, DPANN, Archaea

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6063..6557
DNA (495bp) protein (165aa)
id=5041897 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
S35_SO-1_scaffold_291090_12

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6679..7380
DNA (702bp) protein (234aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5048456 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
S35_SO-1_scaffold_291090_13
CG_Woesearch_02, Woesearchaeota, Archaea

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7441..8862
DNA (1422bp) protein (474aa)
Phosphoesterase, RecJ-like protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RBX6_9EURY id=5103092 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phosphoesterase, RecJ-like protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_291090_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(9182..9745)
DNA (564bp) protein (188aa)
hypothetical protein; K09120 hypothetical protein id=5047421 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_291090_15

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comp(9747..9989)
DNA (243bp) protein (81aa)
Marine sediment metagenome DNA, contig: S01H1_L03091 {ECO:0000313|EMBL:GAF84724.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
id=5046912 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
S35_SO-1_scaffold_291090_16
unknown

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comp(9973..10071)
DNA (99bp) protein (33aa)

This feature has no annotations

Displaying 16 items

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