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S35_SO-1_scaffold_466994

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_466994_1
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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1..144
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP27104.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
id=5800315 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
S35_SO-1_scaffold_466994_2
CG_Woesearch_02, Woesearchaeota, Archaea

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250..681
DNA (432bp) protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Clostridium ljungdahlii (strain ATCC 55383 / DSM 13528 / PETC) RepID=D8GQF9_CLOLD
Tax=CG_Woesearch_02
S35_SO-1_scaffold_466994_3
unknown

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700..822
DNA (123bp) protein (41aa)

This feature has no annotations

S35_SO-1_scaffold_466994_4
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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961..1356
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP27106.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
S35_SO-1_scaffold_466994_5
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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comp(1582..2205)
DNA (624bp) protein (208aa)
dTMP kinase (EC:2.7.4.9)
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=5241644 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative thymidylate kinase {ECO:0000313|EMBL:KKP27107.1}; TaxID=1618806 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_31_28.;"
S35_SO-1_scaffold_466994_6
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2287..3012
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBY5_AMMDK
hypothetical protein
Tax=S_Thermoanaerobacterales_50_218
S35_SO-1_scaffold_466994_7
Blastocystis hominis, Blastocystis, Eukaryota

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comp(3009..3926)
DNA (918bp) protein (306aa)
Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_1 n=1 Tax=Blastocystis hominis RepID=D8LXL3_BLAHO
Singapore isolate B (sub-type 7) whole genome shotgun sequence assembly, scaffold_1 {ECO:0000313|EMBL:CBK20318.2}; TaxID=12968 species="Eukaryota; Stramenopiles; Blastocystis.;" source="Blastocystis hominis.;"
S35_SO-1_scaffold_466994_8
AR15, Woesearchaeaota, DPANN, Archaea

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comp(3980..4213)
DNA (234bp) protein (78aa)
UPF0235 protein MSWAN_0547 id=5799721 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S35_SO-1_scaffold_466994_9
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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4318..4860
DNA (543bp) protein (181aa)
Two component, sigma54 specific, transcriptional regulator, Fis family id=4570027 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
response regulator receiver
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
S35_SO-1_scaffold_466994_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4851..5138)
DNA (288bp) protein (96aa)
Transcription-associated protein TFIIS n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VZ68_9EURY id=5103330 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription-associated protein TFIIS
Tax=AR11
S35_SO-1_scaffold_466994_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5205..5840)
DNA (636bp) protein (212aa)
Peptidase S26B, eukaryotic signal peptidase id=5043727 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_466994_12

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6086..6541
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51032.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NMD3-related protein (nonsense mediated mRNA decay); K07562 nonsense-mediated mRNA decay protein 3 id=5043728 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Nmd3
S35_SO-1_scaffold_466994_13
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(6530..7699)
DNA (1170bp) protein (390aa)
hypothetical protein; K09150 hypothetical protein id=5043729 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_01
S35_SO-1_scaffold_466994_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7777..8172
DNA (396bp) protein (132aa)
MarR family transcriptional regulator (EC:2.7.1.161)
Riboflavin kinase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX73_FERPA
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
S35_SO-1_scaffold_466994_15

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8408..8803
DNA (396bp) protein (132aa)
Riboflavin synthase {ECO:0000313|EMBL:KHO51030.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KHO51030.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
ribC; riboflavin synthase subunit alpha (EC:2.5.1.-)
Riboflavin synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8IAL4_METCZ
Displaying 15 items

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