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S35_SO-1_scaffold_18550

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_18550_1
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(3..341)
DNA (339bp) protein (113aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase (Non-peptidoglycan organisms) n=1 Tax=Clostridium sp. CAG:81 RepID=R5G416_9CLOT
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
S35_SO-1_scaffold_18550_2
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(334..1653)
DNA (1320bp) protein (440aa)
aspartate kinase (EC:2.7.2.4)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003791EAE
Tax=RBG_16_Planctomycetes_59_8_curated
S35_SO-1_scaffold_18550_3
RBG_16_RIF05_58_8_curated, RIF5, Bacteria

Not on your lists

comp(1654..2115)
DNA (462bp) protein (154aa)
GCN5-related N-acetyltransferase n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z026_9EURY
GCN5-like N-acetyltransferase
Tax=RBG_16_RIF05_58_8_curated
S35_SO-1_scaffold_18550_4
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(2112..3326)
DNA (1215bp) protein (405aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase id=3448624 bin=GWC2_ACD39_50_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=GWC2_ACD39_50_8_curated
S35_SO-1_scaffold_18550_5
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3328..4605)
DNA (1278bp) protein (426aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSR9_METAC
S35_SO-1_scaffold_18550_6
unknown

Not on your lists

comp(4614..4877)
DNA (264bp) protein (88aa)

This feature has no annotations

S35_SO-1_scaffold_18550_7
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4919..5797)
DNA (879bp) protein (293aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase id=4801457 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RBG_16_Deltaproteobacteria_64_85_curated
S35_SO-1_scaffold_18550_8
Neochlamydia sp. EPS4, Neochlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(5799..6551)
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018107}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018107};; TaxID=1478175 species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Neochlamydia.;" source="Neochlamydia sp. EPS4.;"
dihydrodipicolinate reductase (EC:1.3.1.26)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000373A4F5
S35_SO-1_scaffold_18550_9
unknown

Not on your lists

comp(6592..6780)
DNA (189bp) protein (63aa)

This feature has no annotations

S35_SO-1_scaffold_18550_10
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6852..7505
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R555_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK80590.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
S35_SO-1_scaffold_18550_11
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(7542..8729)
DNA (1188bp) protein (396aa)
Saccharopine dehydrogenase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVX1_9FLAO
saccharopine dehydrogenase
Tax=RBG_13_Caldithrix_44_9_curated
S35_SO-1_scaffold_18550_12
unknown

Not on your lists

8990..9268
DNA (279bp) protein (93aa)

This feature has no annotations

S35_SO-1_scaffold_18550_13

Not on your lists

comp(9269..9613)
DNA (345bp) protein (115aa)
Peptidyl-tRNA hydrolase, PTH2 family {ECO:0000313|EMBL:KHO50116.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KHO50116.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Peptidyl-tRNA hydrolase id=5799736 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidyl-tRNA hydrolase
S35_SO-1_scaffold_18550_14
unknown

Not on your lists

9956..10069
DNA (114bp) protein (38aa)

This feature has no annotations

S35_SO-1_scaffold_18550_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10143..11213)
DNA (1071bp) protein (357aa)
leucyl aminopeptidase (EC:3.4.11.-)
Putative leucyl aminopeptidase n=1 Tax=Spirochaeta thermophila (strain ATCC 49972 / DSM 6192 / RI 19.B1) RepID=E0RNA1_SPITD
Tax=AR11
S35_SO-1_scaffold_18550_16
unknown

Not on your lists

comp(11318..12184)
DNA (867bp) protein (289aa)

This feature has no annotations

S35_SO-1_scaffold_18550_17
GWC1_OD1_42_11, Parcubacteria, Bacteria

Not on your lists

12276..13124
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS27912.1}; TaxID=1618905 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_42_11.;"
alpha/beta hydrolase fold protein id=14430970 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
S35_SO-1_scaffold_18550_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

13206..13871
DNA (666bp) protein (222aa)
hypothetical protein
HAD superfamily (subfamily IA) hydrolase, TIGR02253; K07025 putative hydrolase of the HAD superfamily id=5241563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR11
S35_SO-1_scaffold_18550_19
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

14002..14151
DNA (150bp) protein (50aa)
hypothetical protein
hypothetical protein id=14427386 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=CG_Elusi_05
S35_SO-1_scaffold_18550_20
unknown

Not on your lists

comp(14465..14641)
DNA (177bp) protein (59aa)

This feature has no annotations

S35_SO-1_scaffold_18550_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14869..15096)
DNA (228bp) protein (76aa)
Tax=AR11
S35_SO-1_scaffold_18550_22
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

comp(15140..15994)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BEG4_9ZZZZ
hypothetical protein
Tax=CG_Micra_01
S35_SO-1_scaffold_18550_23
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15991..19362)
DNA (3372bp) protein (1124aa)
5-methyltetrahydrofolate--homocysteine methyltransferase n=1 Tax=Alicyclobacillus pohliae RepID=UPI00035C4294
5-methyltetrahydrofolate--homocysteine methyltransferase
5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:AGA57874.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
S35_SO-1_scaffold_18550_24
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20074..20241)
DNA (168bp) protein (56aa)
50S ribosomal protein L37e n=1 Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E3M0_METRM
ribosomal protein L37e Rpl37e
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
S35_SO-1_scaffold_18550_25
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20261..20554)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367D4C7
Like-Sm ribonucleoprotein core
Tax=AR11
S35_SO-1_scaffold_18550_26
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(20652..21059)
DNA (408bp) protein (136aa)
hypothetical protein id=5042332 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RBG_16_Pacearchaeota_35_8_curated
S35_SO-1_scaffold_18550_27

Not on your lists

21134..21514
DNA (381bp) protein (127aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S8e
S35_SO-1_scaffold_18550_28
unknown

Not on your lists

21591..22292
DNA (702bp) protein (234aa)

This feature has no annotations

S35_SO-1_scaffold_18550_29

Not on your lists

22332..23030
DNA (699bp) protein (233aa)
HhH-GPD family protein id=5800764 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
HhH-GPD family protein {ECO:0000313|EMBL:AJF62094.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
S35_SO-1_scaffold_18550_30
unknown

Not on your lists

23032..23196
DNA (165bp) protein (55aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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