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S35_SO-1_scaffold_63362

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_63362_1
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..3242)
DNA (3240bp) protein (1080aa)
hypothetical protein; K13525 transitional endoplasmic reticulum ATPase id=5042288 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
cell division protein CDC48
Tax=AR11
S35_SO-1_scaffold_63362_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3403..3669)
DNA (267bp) protein (89aa)
hypothetical protein id=5041664 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=AR11
S35_SO-1_scaffold_63362_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3635..3787)
DNA (153bp) protein (51aa)
Tax=AR11
S35_SO-1_scaffold_63362_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(3837..5597)
DNA (1761bp) protein (587aa)
DNA ligase id=5800225 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_63362_5

Not on your lists

5688..6350
DNA (663bp) protein (221aa)
Nitroreductase {ECO:0000313|EMBL:KHO49696.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Nitroreductase id=5799753 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
nitroreductase family protein
S35_SO-1_scaffold_63362_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(6656..7726)
DNA (1071bp) protein (357aa)
Cell division protein FtsZ id=5799752 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
Tax=CG_Woesearch_01
S35_SO-1_scaffold_63362_7

Not on your lists

8113..8538
DNA (426bp) protein (142aa)
Diphthine synthase {ECO:0000256|HAMAP-Rule:MF_01084}; EC=2.1.1.98 {ECO:0000256|HAMAP-Rule:MF_01084};; Diphthamide biosynthesis methyltransferase {ECO:0000256|HAMAP-Rule:MF_01084}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Diphthine synthase; K00586 diphthine synthase [EC:2.1.1.98] id=5047325 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
S35_SO-1_scaffold_63362_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

8559..8798
DNA (240bp) protein (80aa)
Uncharacterized protein id=5799750 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Diphthine synthase
Tax=AR11
S35_SO-1_scaffold_63362_9
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(8791..9852)
DNA (1062bp) protein (354aa)
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase (EC:2.6.1.52)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CAC5_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
S35_SO-1_scaffold_63362_10
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9852..11747)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036A95E9
Uncharacterized protein {ECO:0000313|EMBL:GAL85027.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
3-phosphoglycerate dehydrogenase
S35_SO-1_scaffold_63362_11

Not on your lists


13119..13574
DNA (456bp) protein (152aa)
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S15/S13e id=5799745 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S15/S13e
S35_SO-1_scaffold_63362_12
unknown

Not on your lists

comp(13612..14277)
DNA (666bp) protein (222aa)

This feature has no annotations

S35_SO-1_scaffold_63362_13

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comp(14353..15279)
DNA (927bp) protein (309aa)
Small subunit ribosomal protein S1, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:KHO49716.1}; EC=1.17.1.2 {ECO:0000313|EMBL:KHO49716.1};; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DIN9_HYDTT
lytB; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
S35_SO-1_scaffold_63362_14
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(15319..16155)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1W7_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL99254.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
S35_SO-1_scaffold_63362_15
unknown

Not on your lists

comp(16414..16674)
DNA (261bp) protein (87aa)

This feature has no annotations

S35_SO-1_scaffold_63362_16
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16707..17555)
DNA (849bp) protein (283aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=632335 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 /; I77R1B).;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Caldicellulosiruptor RepID=E4S9R8_CALKI
4-diphosphocytidyl-2C-methyl-D-erythritol kinase
S35_SO-1_scaffold_63362_17
unknown

Not on your lists

17667..17996
DNA (330bp) protein (110aa)

This feature has no annotations

S35_SO-1_scaffold_63362_18
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18009..19178)
DNA (1170bp) protein (390aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12); K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] id=5090670 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000313|EMBL:KKR78760.1}; Flags: Fragment;; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
S35_SO-1_scaffold_63362_19
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(19190..20029)
DNA (840bp) protein (280aa)
hypothetical protein id=29017 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
methyltransferase type 11
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
S35_SO-1_scaffold_63362_20
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20026..21003)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003673C7C
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000313|EMBL:KKR78761.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase
Displaying 20 items

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