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S35_SO-1_scaffold_56599

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_56599_1

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25..705
DNA (681bp) protein (227aa)
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L1 {ECO:0000313|EMBL:KHO45733.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L1
S35_SO-1_scaffold_56599_2

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777..1871
DNA (1095bp) protein (365aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L10
S35_SO-1_scaffold_56599_3
AR11, Woesearchaeaota, DPANN, Archaea

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1906..2217
DNA (312bp) protein (104aa)
50S ribosomal protein L12; K02869 large subunit ribosomal protein L12 id=5049221 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl12p; 50S ribosomal protein L12
Tax=AR11
S35_SO-1_scaffold_56599_4
CG_Woesearch_02, Woesearchaeota, Archaea

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2229..3110
DNA (882bp) protein (294aa)
Uncharacterized protein (Fragment) id=5800444 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_56599_5
unknown

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comp(3107..3529)
DNA (423bp) protein (141aa)

This feature has no annotations

S35_SO-1_scaffold_56599_6

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comp(3572..3754)
DNA (183bp) protein (61aa)
30S ribosomal protein S27ae n=1 Tax=sediment metagenome RepID=D9PM36_9ZZZZ
30S ribosomal protein S27ae {ECO:0000313|EMBL:EFK95392.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Ribosomal protein S27ae
S35_SO-1_scaffold_56599_7
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(3759..4046)
DNA (288bp) protein (96aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
S35_SO-1_scaffold_56599_8
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4053..4238)
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase, subunit E
S35_SO-1_scaffold_56599_9
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4253..4843)
DNA (591bp) protein (197aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
DNA-directed RNA polymerase subunit E
S35_SO-1_scaffold_56599_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5083..5478)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
nucleic acid-binding protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_56599_11
R_RIF_OD1_13_52_23, RIF-OD1-13, Parcubacteria, Bacteria

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5548..5742
DNA (195bp) protein (65aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_52_23_curated
S35_SO-1_scaffold_56599_12
CG_Woesearch_02, Woesearchaeota, Archaea

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5783..6871
DNA (1089bp) protein (363aa)
rRNA (Guanine-N(2)-)-methyltransferase id=5800237 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
Displaying 12 items

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