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S35_SO-1_scaffold_56824

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_56824_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(3..620)
DNA (618bp) protein (206aa)
ORC1-type DNA replication protein id=5800648 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ORC1-type DNA replication protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_56824_2
unknown

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comp(661..981)
DNA (321bp) protein (107aa)

This feature has no annotations

S35_SO-1_scaffold_56824_3

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comp(993..1202)
DNA (210bp) protein (70aa)
UPF0150 protein AF_1072 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=Y1072_ARCFU id=5103599 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S12H4_L00628 {ECO:0000313|EMBL:GAI78303.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
S35_SO-1_scaffold_56824_4
unknown

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comp(1283..1603)
DNA (321bp) protein (107aa)

This feature has no annotations

S35_SO-1_scaffold_56824_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1622..2899)
DNA (1278bp) protein (426aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=SYS_METHJ
Tax=CG_Woesearch_02
S35_SO-1_scaffold_56824_6
unknown

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3050..3178
DNA (129bp) protein (43aa)

This feature has no annotations

S35_SO-1_scaffold_56824_7
unknown

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3172..4818
DNA (1647bp) protein (549aa)

This feature has no annotations

S35_SO-1_scaffold_56824_8

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comp(4824..7667)
DNA (2844bp) protein (948aa)
ATPase {ECO:0000313|EMBL:KHO45162.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ATPase; K06865 ATPase id=5049171 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S35_SO-1_scaffold_56824_9

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comp(7784..9832)
DNA (2049bp) protein (683aa)
transglutaminase domain protein id=5049172 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transglutaminase protein {ECO:0000313|EMBL:KHO45163.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transglutaminase protein
S35_SO-1_scaffold_56824_10
AR4, Woesearchaeaota, DPANN, Archaea

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10404..10781
DNA (378bp) protein (126aa)
translation initiation factor 5A; K03263 translation initiation factor 5A id=5041911 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
translation initiation factor IF-5A
Tax=AR4
S35_SO-1_scaffold_56824_11
AR15, Woesearchaeaota, DPANN, Archaea

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10791..11522
DNA (732bp) protein (244aa)
Pseudouridine synthase id=5800397 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
pseudouridine synthase Rsu
Tax=AR15
S35_SO-1_scaffold_56824_12

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comp(11650..12396)
DNA (747bp) protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52323.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
id=4795199 bin=PER_GWC2_41_7 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
S35_SO-1_scaffold_56824_13

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12794..12943
DNA (150bp) protein (50aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
RNase HII id=5800606 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribonuclease
Displaying 13 items

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