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S35_SO-1_scaffold_29504

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_29504_1

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1..1140
DNA (1140bp) protein (380aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:KHO52952.1}; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Phosphomannomutase id=4769937 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
S35_SO-1_scaffold_29504_2
unknown

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comp(1182..2399)
DNA (1218bp) protein (406aa)

This feature has no annotations

S35_SO-1_scaffold_29504_3
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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2576..2938
DNA (363bp) protein (121aa)
ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component 2 id=5046930 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_29504_4

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2973..3725
DNA (753bp) protein (251aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289};; 20S proteasome alpha subunit {ECO:0000256|HAMAP-Rule:MF_00289}; Proteasome core protein PsmA {ECO:0000256|HAMAP-Rule:MF_00289}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5046929 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Proteasome subunit alpha
S35_SO-1_scaffold_29504_5
AR11, Woesearchaeaota, DPANN, Archaea

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3734..4435
DNA (702bp) protein (234aa)
RNA-associated protein; K14574 ribosome maturation protein SDO1 id=5046928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNA-associated protein
Tax=AR11
S35_SO-1_scaffold_29504_6
unknown

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4437..4685
DNA (249bp) protein (83aa)

This feature has no annotations

S35_SO-1_scaffold_29504_7

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4706..5023
DNA (318bp) protein (106aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative exosome complex RNA-binding protein 1
S35_SO-1_scaffold_29504_8
CG_Woesearch_02, Woesearchaeota, Archaea

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5068..5286
DNA (219bp) protein (73aa)
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 id=5045735 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
putative exosome complex RNA-binding protein 1
Tax=CG_Woesearch_02
S35_SO-1_scaffold_29504_9
GWA2_OP11_46_7, Microgenomates, Bacteria

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5283..5993
DNA (711bp) protein (237aa)
Exosome complex exonuclease Rrp41 {ECO:0000313|EMBL:KKU44650.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5046926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
exosome complex exonuclease Rrp41
S35_SO-1_scaffold_29504_10
GWA2_OP11_46_7, Microgenomates, Bacteria

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5993..6766
DNA (774bp) protein (258aa)
3'-5' exoribonuclease {ECO:0000313|EMBL:KKU44649.1}; TaxID=1618502 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_7.;"
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal RNA-processing protein RRP42
S35_SO-1_scaffold_29504_11
unknown

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6778..7029
DNA (252bp) protein (84aa)

This feature has no annotations

S35_SO-1_scaffold_29504_12
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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7047..7319
DNA (273bp) protein (91aa)
Uncharacterized protein id=2893899 bin=GWF2_Ignavibacteria_33_9 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=GWF2_RIF_IGX_33_9_curated
S35_SO-1_scaffold_29504_13
unknown

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7328..7648
DNA (321bp) protein (107aa)

This feature has no annotations

S35_SO-1_scaffold_29504_14
unknown

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comp(7651..8067)
DNA (417bp) protein (139aa)

This feature has no annotations

S35_SO-1_scaffold_29504_15
unknown

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8155..8574
DNA (420bp) protein (140aa)

This feature has no annotations

S35_SO-1_scaffold_29504_16
unknown

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comp(8575..8976)
DNA (402bp) protein (134aa)

This feature has no annotations

S35_SO-1_scaffold_29504_17
unknown

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comp(8960..9433)
DNA (474bp) protein (158aa)

This feature has no annotations

S35_SO-1_scaffold_29504_18
unknown

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comp(9435..9689)
DNA (255bp) protein (85aa)

This feature has no annotations

S35_SO-1_scaffold_29504_19

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comp(9737..10492)
DNA (756bp) protein (252aa)
id=5042269 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46767.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
S35_SO-1_scaffold_29504_20
unknown

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comp(10675..10920)
DNA (246bp) protein (82aa)

This feature has no annotations

S35_SO-1_scaffold_29504_21

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comp(10979..12058)
DNA (1080bp) protein (360aa)
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Cell division protein FtsZ id=5799752 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
S35_SO-1_scaffold_29504_22
AR18, Woesearchaeaota, DPANN, Archaea

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comp(12314..12691)
DNA (378bp) protein (126aa)
id=5048320 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S35_SO-1_scaffold_29504_23
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12688..12924)
DNA (237bp) protein (79aa)
id=5048319 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
S35_SO-1_scaffold_29504_24
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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comp(12980..13318)
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU47139.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
S35_SO-1_scaffold_29504_25
unknown

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13501..13731
DNA (231bp) protein (77aa)

This feature has no annotations

S35_SO-1_scaffold_29504_26
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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comp(13736..15262)
DNA (1527bp) protein (509aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU47141.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
hypothetical protein id=5042329 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
S35_SO-1_scaffold_29504_27
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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comp(15302..16294)
DNA (993bp) protein (331aa)
Probable tRNA pseudouridine synthase B n=13 Tax=Thermococcaceae RepID=TRUB_PYRFU id=5103295 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
putative tRNA pseudouridine synthase B
S35_SO-1_scaffold_29504_28
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16333..16866)
DNA (534bp) protein (178aa)
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
Tax=AR11
S35_SO-1_scaffold_29504_29
AR15, Woesearchaeaota, DPANN, Archaea

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comp(16868..17041)
DNA (174bp) protein (58aa)
id=5800694 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=AR15
S35_SO-1_scaffold_29504_30
AR17, Woesearchaeaota, DPANN, Archaea

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comp(17043..17402)
DNA (360bp) protein (120aa)
DNA-binding protein; K06875 programmed cell death protein 5 id=5049180 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-binding protein
Tax=AR17
Displaying items 1-30 of 39 in total

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