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S35_SO-1_scaffold_171322

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_171322_1

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1..480
DNA (480bp) protein (160aa)
Dihydroorotase, multifunctional complex type n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AMD4_SEBTE
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
dihydroorotase
S35_SO-1_scaffold_171322_2
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

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470..1096
DNA (627bp) protein (209aa)
Orotate phosphoribosyltransferase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2S5_HERA2
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KKW16468.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
orotate phosphoribosyltransferase
S35_SO-1_scaffold_171322_3
unknown

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1093..1182
DNA (90bp) protein (30aa)

This feature has no annotations

S35_SO-1_scaffold_171322_4

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1183..1875
DNA (693bp) protein (231aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5046258 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KHO53019.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
S35_SO-1_scaffold_171322_5

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1910..2347
DNA (438bp) protein (146aa)
PEBP family protein {ECO:0000313|EMBL:KHO52870.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Phospholipid-binding protein, PBP family id=2274783 bin=GWB2_Pelobacter_53_15 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
PEBP family protein
S35_SO-1_scaffold_171322_6
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

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2396..2602
DNA (207bp) protein (69aa)
Uncharacterized protein family UPF0150 n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKU47138.1}; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
hypothetical protein
S35_SO-1_scaffold_171322_7
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2603..2830
DNA (228bp) protein (76aa)
YcfA family protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V7_9EURY
YcfA family protein {ECO:0000313|EMBL:EHQ36250.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
YcfA family protein
S35_SO-1_scaffold_171322_8

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2827..3354
DNA (528bp) protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57798.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative Rossmann fold nucleotide-binding protein
S35_SO-1_scaffold_171322_9
unknown

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comp(3371..3538)
DNA (168bp) protein (56aa)

This feature has no annotations

S35_SO-1_scaffold_171322_trna_1
unknown

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3389..3480
DNA (92bp)
transferRNA Ala
S35_SO-1_scaffold_171322_10
CG_Woesearch_02, Woesearchaeota, Archaea

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3683..4840
DNA (1158bp) protein (386aa)
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Tax=CG_Woesearch_02
S35_SO-1_scaffold_171322_11
AR11, Woesearchaeaota, DPANN, Archaea

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4837..5814
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XL1_METBU
hydrolase
Tax=AR11
S35_SO-1_scaffold_171322_12
unknown

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comp(6139..6753)
DNA (615bp) protein (205aa)

This feature has no annotations

S35_SO-1_scaffold_171322_13
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6778..7950)
DNA (1173bp) protein (391aa)
Glucose/sorbosone dehydrogenase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KVQ5_METHD
glucose/sorbosone dehydrogenase
Glucose/sorbosone dehydrogenase {ECO:0000313|EMBL:AGB49522.1}; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
S35_SO-1_scaffold_171322_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8025..8783
DNA (759bp) protein (253aa)
lipoate-protein ligase A, C-terminal fragment; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=5041696 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Lipoate-protein ligase A (EC:2.7.7.63)
Tax=RBG_16_Euryarchaeota_41_19_curated
S35_SO-1_scaffold_171322_15

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comp(9093..10415)
DNA (1323bp) protein (441aa)
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5048732 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
pyruvate dehydrogenase E2 component dihydrolipoamide acetyltransferase (EC:2.3.1.12)
Uncharacterized protein {ECO:0000313|EMBL:KHO45395.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
S35_SO-1_scaffold_171322_16

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comp(10641..11615)
DNA (975bp) protein (325aa)
Transketolase central region id=5799639 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Transketolase central region {ECO:0000313|EMBL:AJF60970.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
transketolase, central region
S35_SO-1_scaffold_171322_17

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comp(11942..13009)
DNA (1068bp) protein (356aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha id=5799638 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:AJF60969.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
S35_SO-1_scaffold_171322_18
AR13, Pacearchaeaota, DPANN, Archaea

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comp(13056..13418)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003705994
PIN protein
Tax=AR13
S35_SO-1_scaffold_171322_19
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(13415..13666)
DNA (252bp) protein (84aa)
Tax=CG_Pacearch_03
S35_SO-1_scaffold_171322_20
AR15, Woesearchaeaota, DPANN, Archaea

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comp(13700..14581)
DNA (882bp) protein (294aa)
Probable lipoyl synthase id=5799637 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
lipoate synthase
Tax=AR15
S35_SO-1_scaffold_171322_21
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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comp(14581..14892)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEF6_DESAR
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
S35_SO-1_scaffold_171322_22
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(14951..15415)
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SRW5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:BAL58901.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
cupin domain-containing protein
S35_SO-1_scaffold_171322_23

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15549..16394
DNA (846bp) protein (282aa)
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] id=5046293 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thymidylate synthase {ECO:0000313|EMBL:KHO46094.1}; EC=2.1.1.45 {ECO:0000313|EMBL:KHO46094.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
thymidylate synthase (EC:2.1.1.45)
S35_SO-1_scaffold_171322_24
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

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16396..16875
DNA (480bp) protein (160aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000371E8C2
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
S35_SO-1_scaffold_171322_25
GWB2_WOR_2_45_9_curated, WOR-2, Bacteria

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comp(16865..17698)
DNA (834bp) protein (278aa)
hypothetical protein id=2152025 bin=GWB2_CP_45_9 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
membrane protein
Tax=GWB2_WOR_2_45_9_curated
S35_SO-1_scaffold_171322_26
unknown

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comp(17707..17901)
DNA (195bp) protein (65aa)

This feature has no annotations

S35_SO-1_scaffold_171322_27
AR11, Woesearchaeaota, DPANN, Archaea

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comp(17910..18029)
DNA (120bp) protein (40aa)
Tax=AR11
Displaying 28 items

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