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S35_SO-1_scaffold_196823

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S35_SO-1_scaffold_196823_1

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comp(1..372)
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:AIF00785.1}; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_139_C07.;"
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV
S35_SO-1_scaffold_196823_2
CG_Woesearch_02, Woesearchaeota, Archaea

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601..942
DNA (342bp) protein (114aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5045790 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl7ae; 50S ribosomal protein L7Ae
Tax=CG_Woesearch_02
S35_SO-1_scaffold_196823_3
RIFOXYA2_FULL_Ignavibacteria_37_17_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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944..1273
DNA (330bp) protein (110aa)
30S ribosomal protein S28e id=5800776 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S28e
Tax=RIFOXYA2_FULL_Ignavibacteria_37_17_curated
S35_SO-1_scaffold_196823_4
AR11, Woesearchaeaota, DPANN, Archaea

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1486..1680
DNA (195bp) protein (65aa)
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L24
Tax=AR11
S35_SO-1_scaffold_196823_5

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1677..1997
DNA (321bp) protein (107aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045788 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
nucleoside-diphosphate kinase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KHO52669.1}; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
S35_SO-1_scaffold_196823_6
unknown

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1984..2322
DNA (339bp) protein (113aa)

This feature has no annotations

S35_SO-1_scaffold_196823_7

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2413..4605
DNA (2193bp) protein (731aa)
Elongation factor 2 {ECO:0000313|EMBL:KHO51329.1}; Flags: Fragment;; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5045787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Elongation factor 2
S35_SO-1_scaffold_196823_8
unknown

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4612..4935
DNA (324bp) protein (108aa)

This feature has no annotations

S35_SO-1_scaffold_196823_9
BJP_IG2157_CP_49_12, Bacteria

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comp(5067..5294)
DNA (228bp) protein (76aa)
YcfA family protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1Z0V7_9EURY
YcfA family protein
Tax=BJP_IG2157_CP_49_12
S35_SO-1_scaffold_196823_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(5295..5519)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E2327
hypothetical protein
Tax=RBG_13_Woesearchaeota_36_6_curated
S35_SO-1_scaffold_196823_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(5545..6150)
DNA (606bp) protein (202aa)
tRNA methylase id=5046019 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
Tax=CG_Woesearch_02
Displaying 11 items

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